[M::ha_analyze_count] lowest: count[5] = 561690
[M::ha_analyze_count] highest: count[19] = 20247901
[M::ha_hist_line]     2: ************************* 4985368
[M::ha_hist_line]     3: ******* 1323787
[M::ha_hist_line]     4: *** 706649
[M::ha_hist_line]     5: *** 561690
[M::ha_hist_line]     6: *** 661322
[M::ha_hist_line]     7: ***** 939723
[M::ha_hist_line]     8: ******* 1460190
[M::ha_hist_line]     9: ************ 2346625
[M::ha_hist_line]    10: ****************** 3654988
[M::ha_hist_line]    11: *************************** 5388224
[M::ha_hist_line]    12: ************************************* 7569365
[M::ha_hist_line]    13: ************************************************** 10140711
[M::ha_hist_line]    14: *************************************************************** 12854530
[M::ha_hist_line]    15: ***************************************************************************** 15535173
[M::ha_hist_line]    16: **************************************************************************************** 17729991
[M::ha_hist_line]    17: *********************************************************************************************** 19291896
[M::ha_hist_line]    18: *************************************************************************************************** 20100458
[M::ha_hist_line]    19: **************************************************************************************************** 20247901
[M::ha_hist_line]    20: ************************************************************************************************ 19357246
[M::ha_hist_line]    21: **************************************************************************************** 17907060
[M::ha_hist_line]    22: ******************************************************************************** 16106275
[M::ha_hist_line]    23: ********************************************************************** 14201583
[M::ha_hist_line]    24: ************************************************************* 12361198
[M::ha_hist_line]    25: ***************************************************** 10739547
[M::ha_hist_line]    26: *********************************************** 9542597
[M::ha_hist_line]    27: ******************************************* 8677773
[M::ha_hist_line]    28: ***************************************** 8231068
[M::ha_hist_line]    29: ***************************************** 8219253
[M::ha_hist_line]    30: ****************************************** 8491830
[M::ha_hist_line]    31: ******************************************** 9003647
[M::ha_hist_line]    32: ************************************************ 9716960
[M::ha_hist_line]    33: **************************************************** 10482222
[M::ha_hist_line]    34: ******************************************************* 11190971
[M::ha_hist_line]    35: *********************************************************** 11853199
[M::ha_hist_line]    36: ************************************************************* 12283875
[M::ha_hist_line]    37: ************************************************************** 12615925
[M::ha_hist_line]    38: ************************************************************** 12573667
[M::ha_hist_line]    39: ************************************************************* 12426275
[M::ha_hist_line]    40: ************************************************************ 12068448
[M::ha_hist_line]    41: ********************************************************* 11508341
[M::ha_hist_line]    42: ***************************************************** 10764582
[M::ha_hist_line]    43: ************************************************* 9920347
[M::ha_hist_line]    44: ******************************************** 8952820
[M::ha_hist_line]    45: *************************************** 7942066
[M::ha_hist_line]    46: ********************************** 6873858
[M::ha_hist_line]    47: ***************************** 5947329
[M::ha_hist_line]    48: ************************* 5041516
[M::ha_hist_line]    49: ********************* 4240668
[M::ha_hist_line]    50: ***************** 3506434
[M::ha_hist_line]    51: ************** 2892024
[M::ha_hist_line]    52: ************ 2356615
[M::ha_hist_line]    53: ********** 1925644
[M::ha_hist_line]    54: ******** 1576288
[M::ha_hist_line]    55: ****** 1288072
[M::ha_hist_line]    56: ***** 1054963
[M::ha_hist_line]    57: **** 883452
[M::ha_hist_line]    58: **** 730141
[M::ha_hist_line]    59: *** 605554
[M::ha_hist_line]    60: *** 526637
[M::ha_hist_line]    61: ** 466068
[M::ha_hist_line]    62: ** 418565
[M::ha_hist_line]    63: ** 384013
[M::ha_hist_line]    64: ** 350969
[M::ha_hist_line]    65: ** 329261
[M::ha_hist_line]    66: ** 308489
[M::ha_hist_line]    67: * 293779
[M::ha_hist_line]    68: * 280766
[M::ha_hist_line]    69: * 276378
[M::ha_hist_line]    70: * 266341
[M::ha_hist_line]    71: * 255890
[M::ha_hist_line]    72: * 249444
[M::ha_hist_line]    73: * 243582
[M::ha_hist_line]    74: * 236903
[M::ha_hist_line]    75: * 231493
[M::ha_hist_line]    76: * 226935
[M::ha_hist_line]    77: * 222498
[M::ha_hist_line]    78: * 217766
[M::ha_hist_line]    79: * 210564
[M::ha_hist_line]    80: * 200584
[M::ha_hist_line]    81: * 196384
[M::ha_hist_line]    82: * 190756
[M::ha_hist_line]    83: * 181029
[M::ha_hist_line]    84: * 174545
[M::ha_hist_line]    85: * 166001
[M::ha_hist_line]    86: * 159961
[M::ha_hist_line]    87: * 152174
[M::ha_hist_line]    88: * 146386
[M::ha_hist_line]    89: * 140407
[M::ha_hist_line]    90: * 131438
[M::ha_hist_line]    91: * 124901
[M::ha_hist_line]    92: * 122588
[M::ha_hist_line]    93: * 116150
[M::ha_hist_line]    94: * 111512
[M::ha_hist_line]    95: * 106692
[M::ha_hist_line]  rest: ********************************** 6856090
[M::ha_analyze_count] left: none
[M::ha_analyze_count] right: count[37] = 12615925
[M::ha_ft_gen] peak_hom: 37; peak_het: 19
[M::ha_ft_gen::1104.093*6.08@24.955GB] ==> filtered out 3038845 k-mers occurring 185 or more times
[M::ha_opt_update_cov] updated max_n_chain to 185
[M::ha_pt_gen::1618.305*6.35] ==> counted 34204298 distinct minimizer k-mers
[M::ha_pt_gen] count[4095] = 0 (for sanity check)
[M::ha_analyze_count] lowest: count[6] = 44245
[M::ha_analyze_count] highest: count[18] = 952885
[M::ha_hist_line]     1: ****************************************************************************************************> 11717164
[M::ha_hist_line]     2: ****************************************************** 513059
[M::ha_hist_line]     3: *************** 141886
[M::ha_hist_line]     4: ******* 68699
[M::ha_hist_line]     5: ***** 46184
[M::ha_hist_line]     6: ***** 44245
[M::ha_hist_line]     7: ****** 54906
[M::ha_hist_line]     8: ******** 79299
[M::ha_hist_line]     9: ************* 122877
[M::ha_hist_line]    10: ******************** 187031
[M::ha_hist_line]    11: **************************** 271498
[M::ha_hist_line]    12: **************************************** 378459
[M::ha_hist_line]    13: ***************************************************** 503086
[M::ha_hist_line]    14: ****************************************************************** 632017
[M::ha_hist_line]    15: ******************************************************************************* 756460
[M::ha_hist_line]    16: ****************************************************************************************** 854932
[M::ha_hist_line]    17: ************************************************************************************************* 922752
[M::ha_hist_line]    18: **************************************************************************************************** 952885
[M::ha_hist_line]    19: **************************************************************************************************** 952388
[M::ha_hist_line]    20: *********************************************************************************************** 901310
[M::ha_hist_line]    21: *************************************************************************************** 826489
[M::ha_hist_line]    22: ***************************************************************************** 737041
[M::ha_hist_line]    23: ******************************************************************** 643399
[M::ha_hist_line]    24: *********************************************************** 557585
[M::ha_hist_line]    25: ************************************************** 480174
[M::ha_hist_line]    26: ******************************************** 422571
[M::ha_hist_line]    27: **************************************** 382155
[M::ha_hist_line]    28: ************************************** 360038
[M::ha_hist_line]    29: ************************************* 355926
[M::ha_hist_line]    30: ************************************** 365177
[M::ha_hist_line]    31: **************************************** 383417
[M::ha_hist_line]    32: ******************************************* 413314
[M::ha_hist_line]    33: ********************************************** 442507
[M::ha_hist_line]    34: ************************************************* 468024
[M::ha_hist_line]    35: **************************************************** 492359
[M::ha_hist_line]    36: ***************************************************** 506877
[M::ha_hist_line]    37: ****************************************************** 517926
[M::ha_hist_line]    38: ****************************************************** 512271
[M::ha_hist_line]    39: ***************************************************** 503991
[M::ha_hist_line]    40: *************************************************** 487319
[M::ha_hist_line]    41: ************************************************ 461268
[M::ha_hist_line]    42: ********************************************* 429679
[M::ha_hist_line]    43: ***************************************** 394006
[M::ha_hist_line]    44: ************************************* 355040
[M::ha_hist_line]    45: ********************************* 313391
[M::ha_hist_line]    46: **************************** 270735
[M::ha_hist_line]    47: ************************* 234435
[M::ha_hist_line]    48: ********************* 199035
[M::ha_hist_line]    49: ****************** 167527
[M::ha_hist_line]    50: *************** 139806
[M::ha_hist_line]    51: ************ 116101
[M::ha_hist_line]    52: ********** 96392
[M::ha_hist_line]    53: ******** 79931
[M::ha_hist_line]    54: ******* 66865
[M::ha_hist_line]    55: ****** 56110
[M::ha_hist_line]    56: ***** 47742
[M::ha_hist_line]    57: **** 40492
[M::ha_hist_line]    58: **** 35211
[M::ha_hist_line]    59: *** 30146
[M::ha_hist_line]    60: *** 27179
[M::ha_hist_line]    61: *** 24535
[M::ha_hist_line]    62: ** 22619
[M::ha_hist_line]    63: ** 21038
[M::ha_hist_line]    64: ** 19459
[M::ha_hist_line]    65: ** 18299
[M::ha_hist_line]    66: ** 17550
[M::ha_hist_line]    67: ** 16788
[M::ha_hist_line]    68: ** 16036
[M::ha_hist_line]    69: ** 15730
[M::ha_hist_line]    70: ** 14887
[M::ha_hist_line]    71: ** 14650
[M::ha_hist_line]    72: * 14060
[M::ha_hist_line]    73: * 13792
[M::ha_hist_line]    74: * 13573
[M::ha_hist_line]    75: * 13234
[M::ha_hist_line]    76: * 12898
[M::ha_hist_line]    77: * 12452
[M::ha_hist_line]    78: * 12308
[M::ha_hist_line]    79: * 11712
[M::ha_hist_line]    80: * 11422
[M::ha_hist_line]    81: * 11318
[M::ha_hist_line]    82: * 10682
[M::ha_hist_line]    83: * 10294
[M::ha_hist_line]    84: * 9953
[M::ha_hist_line]    85: * 9384
[M::ha_hist_line]    86: * 9216
[M::ha_hist_line]    87: * 9035
[M::ha_hist_line]    88: * 8676
[M::ha_hist_line]    89: * 8119
[M::ha_hist_line]    90: * 7900
[M::ha_hist_line]    91: * 7510
[M::ha_hist_line]    92: * 7202
[M::ha_hist_line]    93: * 7035
[M::ha_hist_line]    94: * 6799
[M::ha_hist_line]    95: * 6566
[M::ha_hist_line]    96: * 6342
[M::ha_hist_line]    97: * 6211
[M::ha_hist_line]    98: * 5956
[M::ha_hist_line]    99: * 5660
[M::ha_hist_line]   100: * 5547
[M::ha_hist_line]   101: * 5414
[M::ha_hist_line]   102: * 5370
[M::ha_hist_line]   103: * 5173
[M::ha_hist_line]   104: * 5280
[M::ha_hist_line]   105: * 4827
[M::ha_hist_line]   106: * 4807
[M::ha_hist_line]   107: * 4810
[M::ha_hist_line]  rest: ****************** 171382
[M::ha_analyze_count] left: none
[M::ha_analyze_count] right: count[37] = 517926
[M::ha_pt_gen] peak_hom: 37; peak_het: 18
[M::ha_pt_gen::1804.579*7.38] ==> indexed 645709208 positions
[M::ha_assemble::11557.593*17.38@24.955GB] ==> corrected reads for round 1
[M::ha_assemble] # bases: 26140820359; # corrected bases: 42804945; # recorrected bases: 47344
[M::ha_assemble] size of buffer: 4.975GB
[M::ha_pt_gen::11726.092*17.37] ==> counted 22615870 distinct minimizer k-mers
[M::ha_pt_gen] count[4095] = 0 (for sanity check)
[M::ha_analyze_count] lowest: count[4] = 15278
[M::ha_analyze_count] highest: count[19] = 952653
[M::ha_hist_line]     1: *************************************************************************************** 829074
[M::ha_hist_line]     2: ******* 66161
[M::ha_hist_line]     3: ** 22363
[M::ha_hist_line]     4: ** 15278
[M::ha_hist_line]     5: ** 16540
[M::ha_hist_line]     6: *** 24679
[M::ha_hist_line]     7: **** 39481
[M::ha_hist_line]     8: ******* 64358
[M::ha_hist_line]     9: *********** 104058
[M::ha_hist_line]    10: ***************** 164986
[M::ha_hist_line]    11: ************************** 244392
[M::ha_hist_line]    12: ************************************ 341780
[M::ha_hist_line]    13: ************************************************* 464355
[M::ha_hist_line]    14: ************************************************************** 589728
[M::ha_hist_line]    15: *************************************************************************** 717285
[M::ha_hist_line]    16: ************************************************************************************** 822204
[M::ha_hist_line]    17: ********************************************************************************************** 897474
[M::ha_hist_line]    18: *************************************************************************************************** 939685
[M::ha_hist_line]    19: **************************************************************************************************** 952653
[M::ha_hist_line]    20: ************************************************************************************************ 914123
[M::ha_hist_line]    21: ***************************************************************************************** 843893
[M::ha_hist_line]    22: ******************************************************************************** 760401
[M::ha_hist_line]    23: ********************************************************************** 669443
[M::ha_hist_line]    24: ************************************************************* 579104
[M::ha_hist_line]    25: **************************************************** 497575
[M::ha_hist_line]    26: ********************************************** 435980
[M::ha_hist_line]    27: **************************************** 384413
[M::ha_hist_line]    28: ************************************** 357593
[M::ha_hist_line]    29: ************************************ 347400
[M::ha_hist_line]    30: ************************************* 350665
[M::ha_hist_line]    31: ************************************** 364965
[M::ha_hist_line]    32: ***************************************** 391156
[M::ha_hist_line]    33: ******************************************** 421429
[M::ha_hist_line]    34: *********************************************** 448439
[M::ha_hist_line]    35: ************************************************** 477032
[M::ha_hist_line]    36: **************************************************** 494484
[M::ha_hist_line]    37: ****************************************************** 510012
[M::ha_hist_line]    38: ****************************************************** 513710
[M::ha_hist_line]    39: ***************************************************** 505640
[M::ha_hist_line]    40: **************************************************** 493875
[M::ha_hist_line]    41: ************************************************** 475114
[M::ha_hist_line]    42: *********************************************** 446556
[M::ha_hist_line]    43: ******************************************* 414299
[M::ha_hist_line]    44: **************************************** 377073
[M::ha_hist_line]    45: *********************************** 337181
[M::ha_hist_line]    46: ******************************* 295583
[M::ha_hist_line]    47: *************************** 256374
[M::ha_hist_line]    48: *********************** 220654
[M::ha_hist_line]    49: ******************** 185983
[M::ha_hist_line]    50: **************** 156989
[M::ha_hist_line]    51: ************** 129909
[M::ha_hist_line]    52: *********** 108669
[M::ha_hist_line]    53: ********* 89607
[M::ha_hist_line]    54: ******** 75686
[M::ha_hist_line]    55: ******* 62888
[M::ha_hist_line]    56: ****** 52727
[M::ha_hist_line]    57: ***** 45413
[M::ha_hist_line]    58: **** 38861
[M::ha_hist_line]    59: *** 32761
[M::ha_hist_line]    60: *** 29350
[M::ha_hist_line]    61: *** 26292
[M::ha_hist_line]    62: *** 23895
[M::ha_hist_line]    63: ** 21881
[M::ha_hist_line]    64: ** 20243
[M::ha_hist_line]    65: ** 19155
[M::ha_hist_line]    66: ** 18069
[M::ha_hist_line]    67: ** 17172
[M::ha_hist_line]    68: ** 16352
[M::ha_hist_line]    69: ** 15731
[M::ha_hist_line]    70: ** 15469
[M::ha_hist_line]    71: ** 14709
[M::ha_hist_line]    72: * 14265
[M::ha_hist_line]    73: * 14082
[M::ha_hist_line]    74: * 13539
[M::ha_hist_line]    75: * 13600
[M::ha_hist_line]    76: * 12866
[M::ha_hist_line]    77: * 12431
[M::ha_hist_line]    78: * 12684
[M::ha_hist_line]    79: * 12163
[M::ha_hist_line]    80: * 11713
[M::ha_hist_line]    81: * 11489
[M::ha_hist_line]    82: * 11155
[M::ha_hist_line]    83: * 10506
[M::ha_hist_line]    84: * 10286
[M::ha_hist_line]    85: * 9891
[M::ha_hist_line]    86: * 9349
[M::ha_hist_line]    87: * 9042
[M::ha_hist_line]    88: * 8862
[M::ha_hist_line]    89: * 8693
[M::ha_hist_line]    90: * 8357
[M::ha_hist_line]    91: * 7636
[M::ha_hist_line]    92: * 7502
[M::ha_hist_line]    93: * 7206
[M::ha_hist_line]    94: * 7012
[M::ha_hist_line]    95: * 6728
[M::ha_hist_line]    96: * 6540
[M::ha_hist_line]    97: * 6446
[M::ha_hist_line]    98: * 6190
[M::ha_hist_line]    99: * 5885
[M::ha_hist_line]   100: * 5540
[M::ha_hist_line]   101: * 5646
[M::ha_hist_line]   102: * 5472
[M::ha_hist_line]   103: * 5156
[M::ha_hist_line]   104: * 5230
[M::ha_hist_line]   105: * 5116
[M::ha_hist_line]   106: * 4960
[M::ha_hist_line]   107: * 4829
[M::ha_hist_line]  rest: ******************* 179292
[M::ha_analyze_count] left: none
[M::ha_analyze_count] right: count[38] = 513710
[M::ha_pt_gen] peak_hom: 38; peak_het: 19
[M::ha_pt_gen::11912.701*17.35] ==> indexed 653848460 positions
[M::ha_assemble::20476.365*18.43@24.955GB] ==> corrected reads for round 2
[M::ha_assemble] # bases: 26134354729; # corrected bases: 930000; # recorrected bases: 13341
[M::ha_assemble] size of buffer: 4.988GB
[M::ha_pt_gen::20643.409*18.42] ==> counted 22340201 distinct minimizer k-mers
[M::ha_pt_gen] count[4095] = 0 (for sanity check)
[M::ha_analyze_count] lowest: count[4] = 12064
[M::ha_analyze_count] highest: count[19] = 952592
[M::ha_hist_line]     1: ************************************************************** 590549
[M::ha_hist_line]     2: ***** 44066
[M::ha_hist_line]     3: ** 15807
[M::ha_hist_line]     4: * 12064
[M::ha_hist_line]     5: ** 14702
[M::ha_hist_line]     6: ** 23503
[M::ha_hist_line]     7: **** 38621
[M::ha_hist_line]     8: ******* 63500
[M::ha_hist_line]     9: *********** 103652
[M::ha_hist_line]    10: ***************** 164127
[M::ha_hist_line]    11: ************************** 243840
[M::ha_hist_line]    12: ************************************ 341378
[M::ha_hist_line]    13: ************************************************* 463488
[M::ha_hist_line]    14: ************************************************************** 589216
[M::ha_hist_line]    15: *************************************************************************** 716821
[M::ha_hist_line]    16: ************************************************************************************** 821841
[M::ha_hist_line]    17: ********************************************************************************************** 897142
[M::ha_hist_line]    18: *************************************************************************************************** 939700
[M::ha_hist_line]    19: **************************************************************************************************** 952592
[M::ha_hist_line]    20: ************************************************************************************************ 914319
[M::ha_hist_line]    21: ***************************************************************************************** 844382
[M::ha_hist_line]    22: ******************************************************************************** 760543
[M::ha_hist_line]    23: ********************************************************************** 669794
[M::ha_hist_line]    24: ************************************************************* 579408
[M::ha_hist_line]    25: **************************************************** 497663
[M::ha_hist_line]    26: ********************************************** 436020
[M::ha_hist_line]    27: **************************************** 384525
[M::ha_hist_line]    28: ************************************** 357637
[M::ha_hist_line]    29: ************************************ 347263
[M::ha_hist_line]    30: ************************************* 350363
[M::ha_hist_line]    31: ************************************** 364835
[M::ha_hist_line]    32: ***************************************** 390840
[M::ha_hist_line]    33: ******************************************** 421299
[M::ha_hist_line]    34: *********************************************** 448208
[M::ha_hist_line]    35: ************************************************** 476729
[M::ha_hist_line]    36: **************************************************** 494461
[M::ha_hist_line]    37: ***************************************************** 509629
[M::ha_hist_line]    38: ****************************************************** 513934
[M::ha_hist_line]    39: ***************************************************** 505523
[M::ha_hist_line]    40: **************************************************** 494449
[M::ha_hist_line]    41: ************************************************** 474935
[M::ha_hist_line]    42: *********************************************** 446905
[M::ha_hist_line]    43: ******************************************** 414530
[M::ha_hist_line]    44: **************************************** 377517
[M::ha_hist_line]    45: *********************************** 337497
[M::ha_hist_line]    46: ******************************* 296027
[M::ha_hist_line]    47: *************************** 256734
[M::ha_hist_line]    48: *********************** 220680
[M::ha_hist_line]    49: ******************** 186322
[M::ha_hist_line]    50: **************** 157149
[M::ha_hist_line]    51: ************** 130154
[M::ha_hist_line]    52: *********** 108689
[M::ha_hist_line]    53: ********* 89819
[M::ha_hist_line]    54: ******** 75846
[M::ha_hist_line]    55: ******* 62979
[M::ha_hist_line]    56: ****** 52821
[M::ha_hist_line]    57: ***** 45481
[M::ha_hist_line]    58: **** 38945
[M::ha_hist_line]    59: *** 32785
[M::ha_hist_line]    60: *** 29387
[M::ha_hist_line]    61: *** 26260
[M::ha_hist_line]    62: *** 23944
[M::ha_hist_line]    63: ** 21875
[M::ha_hist_line]    64: ** 20230
[M::ha_hist_line]    65: ** 19136
[M::ha_hist_line]    66: ** 18098
[M::ha_hist_line]    67: ** 17162
[M::ha_hist_line]    68: ** 16345
[M::ha_hist_line]    69: ** 15738
[M::ha_hist_line]    70: ** 15501
[M::ha_hist_line]    71: ** 14711
[M::ha_hist_line]    72: * 14253
[M::ha_hist_line]    73: * 14062
[M::ha_hist_line]    74: * 13543
[M::ha_hist_line]    75: * 13620
[M::ha_hist_line]    76: * 12845
[M::ha_hist_line]    77: * 12477
[M::ha_hist_line]    78: * 12652
[M::ha_hist_line]    79: * 12183
[M::ha_hist_line]    80: * 11761
[M::ha_hist_line]    81: * 11426
[M::ha_hist_line]    82: * 11179
[M::ha_hist_line]    83: * 10557
[M::ha_hist_line]    84: * 10272
[M::ha_hist_line]    85: * 9883
[M::ha_hist_line]    86: * 9366
[M::ha_hist_line]    87: * 9050
[M::ha_hist_line]    88: * 8871
[M::ha_hist_line]    89: * 8666
[M::ha_hist_line]    90: * 8378
[M::ha_hist_line]    91: * 7623
[M::ha_hist_line]    92: * 7534
[M::ha_hist_line]    93: * 7236
[M::ha_hist_line]    94: * 7008
[M::ha_hist_line]    95: * 6701
[M::ha_hist_line]    96: * 6562
[M::ha_hist_line]    97: * 6436
[M::ha_hist_line]    98: * 6146
[M::ha_hist_line]    99: * 5926
[M::ha_hist_line]   100: * 5564
[M::ha_hist_line]   101: * 5609
[M::ha_hist_line]   102: * 5492
[M::ha_hist_line]   103: * 5163
[M::ha_hist_line]   104: * 5240
[M::ha_hist_line]   105: * 5081
[M::ha_hist_line]   106: * 4957
[M::ha_hist_line]   107: * 4856
[M::ha_hist_line]  rest: ******************* 179388
[M::ha_analyze_count] left: none
[M::ha_analyze_count] right: count[38] = 513934
[M::ha_pt_gen] peak_hom: 38; peak_het: 19
[M::ha_pt_gen::20832.695*18.39] ==> indexed 653882364 positions
[M::ha_assemble::29394.761*18.84@32.734GB] ==> corrected reads for round 3
[M::ha_assemble] # bases: 26134144648; # corrected bases: 110646; # recorrected bases: 5878
[M::ha_assemble] size of buffer: 4.978GB
[M::ha_pt_gen::29554.988*18.83] ==> counted 22303929 distinct minimizer k-mers
[M::ha_pt_gen] count[4095] = 0 (for sanity check)
[M::ha_analyze_count] lowest: count[4] = 11310
[M::ha_analyze_count] highest: count[19] = 952601
[M::ha_hist_line]     1: *********************************************************** 562457
[M::ha_hist_line]     2: **** 39115
[M::ha_hist_line]     3: ** 14304
[M::ha_hist_line]     4: * 11310
[M::ha_hist_line]     5: ** 14437
[M::ha_hist_line]     6: ** 23271
[M::ha_hist_line]     7: **** 38422
[M::ha_hist_line]     8: ******* 63365
[M::ha_hist_line]     9: *********** 103511
[M::ha_hist_line]    10: ***************** 164127
[M::ha_hist_line]    11: ************************** 243798
[M::ha_hist_line]    12: ************************************ 341265
[M::ha_hist_line]    13: ************************************************* 463441
[M::ha_hist_line]    14: ************************************************************** 589174
[M::ha_hist_line]    15: *************************************************************************** 716884
[M::ha_hist_line]    16: ************************************************************************************** 821729
[M::ha_hist_line]    17: ********************************************************************************************** 897143
[M::ha_hist_line]    18: *************************************************************************************************** 939737
[M::ha_hist_line]    19: **************************************************************************************************** 952601
[M::ha_hist_line]    20: ************************************************************************************************ 914327
[M::ha_hist_line]    21: ***************************************************************************************** 844341
[M::ha_hist_line]    22: ******************************************************************************** 760556
[M::ha_hist_line]    23: ********************************************************************** 669828
[M::ha_hist_line]    24: ************************************************************* 579439
[M::ha_hist_line]    25: **************************************************** 497687
[M::ha_hist_line]    26: ********************************************** 435987
[M::ha_hist_line]    27: **************************************** 384528
[M::ha_hist_line]    28: ************************************** 357627
[M::ha_hist_line]    29: ************************************ 347309
[M::ha_hist_line]    30: ************************************* 350356
[M::ha_hist_line]    31: ************************************** 364835
[M::ha_hist_line]    32: ***************************************** 390758
[M::ha_hist_line]    33: ******************************************** 421357
[M::ha_hist_line]    34: *********************************************** 448142
[M::ha_hist_line]    35: ************************************************** 476771
[M::ha_hist_line]    36: **************************************************** 494449
[M::ha_hist_line]    37: ***************************************************** 509648
[M::ha_hist_line]    38: ****************************************************** 513912
[M::ha_hist_line]    39: ***************************************************** 505539
[M::ha_hist_line]    40: **************************************************** 494448
[M::ha_hist_line]    41: ************************************************** 474905
[M::ha_hist_line]    42: *********************************************** 446962
[M::ha_hist_line]    43: ******************************************** 414468
[M::ha_hist_line]    44: **************************************** 377599
[M::ha_hist_line]    45: *********************************** 337520
[M::ha_hist_line]    46: ******************************* 296048
[M::ha_hist_line]    47: *************************** 256759
[M::ha_hist_line]    48: *********************** 220698
[M::ha_hist_line]    49: ******************** 186289
[M::ha_hist_line]    50: **************** 157169
[M::ha_hist_line]    51: ************** 130205
[M::ha_hist_line]    52: *********** 108683
[M::ha_hist_line]    53: ********* 89805
[M::ha_hist_line]    54: ******** 75862
[M::ha_hist_line]    55: ******* 62992
[M::ha_hist_line]    56: ****** 52845
[M::ha_hist_line]    57: ***** 45474
[M::ha_hist_line]    58: **** 38958
[M::ha_hist_line]    59: *** 32774
[M::ha_hist_line]    60: *** 29405
[M::ha_hist_line]    61: *** 26237
[M::ha_hist_line]    62: *** 23950
[M::ha_hist_line]    63: ** 21880
[M::ha_hist_line]    64: ** 20242
[M::ha_hist_line]    65: ** 19133
[M::ha_hist_line]    66: ** 18087
[M::ha_hist_line]    67: ** 17172
[M::ha_hist_line]    68: ** 16346
[M::ha_hist_line]    69: ** 15744
[M::ha_hist_line]    70: ** 15500
[M::ha_hist_line]    71: ** 14717
[M::ha_hist_line]    72: * 14245
[M::ha_hist_line]    73: * 14065
[M::ha_hist_line]    74: * 13552
[M::ha_hist_line]    75: * 13603
[M::ha_hist_line]    76: * 12853
[M::ha_hist_line]    77: * 12478
[M::ha_hist_line]    78: * 12655
[M::ha_hist_line]    79: * 12188
[M::ha_hist_line]    80: * 11758
[M::ha_hist_line]    81: * 11413
[M::ha_hist_line]    82: * 11186
[M::ha_hist_line]    83: * 10560
[M::ha_hist_line]    84: * 10277
[M::ha_hist_line]    85: * 9880
[M::ha_hist_line]    86: * 9366
[M::ha_hist_line]    87: * 9043
[M::ha_hist_line]    88: * 8866
[M::ha_hist_line]    89: * 8668
[M::ha_hist_line]    90: * 8380
[M::ha_hist_line]    91: * 7620
[M::ha_hist_line]    92: * 7538
[M::ha_hist_line]    93: * 7236
[M::ha_hist_line]    94: * 6999
[M::ha_hist_line]    95: * 6698
[M::ha_hist_line]    96: * 6571
[M::ha_hist_line]    97: * 6429
[M::ha_hist_line]    98: * 6151
[M::ha_hist_line]    99: * 5923
[M::ha_hist_line]   100: * 5571
[M::ha_hist_line]   101: * 5606
[M::ha_hist_line]   102: * 5495
[M::ha_hist_line]   103: * 5141
[M::ha_hist_line]   104: * 5264
[M::ha_hist_line]   105: * 5074
[M::ha_hist_line]   106: * 4965
[M::ha_hist_line]   107: * 4863
[M::ha_hist_line]  rest: ******************* 179386
[M::ha_analyze_count] left: none
[M::ha_analyze_count] right: count[38] = 513912
[M::ha_pt_gen] peak_hom: 38; peak_het: 19
[M::ha_pt_gen::29733.990*18.82] ==> indexed 653867763 positions
[M::ha_assemble::30998.651*18.86@35.033GB] ==> found overlaps for the final round
[M::ha_print_ovlp_stat] # overlaps: 83047048
[M::ha_print_ovlp_stat] # strong overlaps: 52423952
[M::ha_print_ovlp_stat] # weak overlaps: 30623096
[M::ha_print_ovlp_stat] # exact overlaps: 80433457
[M::ha_print_ovlp_stat] # inexact overlaps: 2613591
[M::ha_print_ovlp_stat] # overlaps without large indels: 82907951
[M::ha_print_ovlp_stat] # reverse overlaps: 38073867
Writing reads to disk... 
Reads has been written.
Writing ma_hit_ts to disk... 
ma_hit_ts has been written.
Writing ma_hit_ts to disk... 
ma_hit_ts has been written.
bin files have been written.
Writing raw unitig GFA to disk... 
Writing processed unitig GFA to disk... 
[M::purge_dups] purge duplication coverage threshold: 47
[M::purge_dups] purge duplication coverage threshold: 47
[M::adjust_utg_by_primary] primary contig coverage range: [29, infinity]
Writing primary contig GFA to disk... 
Writing alternate contig GFA to disk... 
[M::main] Version: 0.12-r304
[M::main] CMD: hifiasm -o Malus_sylvestris.fa -t 20 SRR12031342_1.fastq.gz
[M::main] Real time: 31485.147 sec; CPU: 585176.602 sec; Peak RSS: 35.033 GB