From f499f3ea019f53235c361e9b5c4e9ae3347175b2 Mon Sep 17 00:00:00 2001 From: Sonya Hanson Date: Sat, 20 May 2017 17:36:57 -0400 Subject: [PATCH 1/2] added line for plotting on cluster --- scripts/quickmodel.py | 3 +++ 1 file changed, 3 insertions(+) diff --git a/scripts/quickmodel.py b/scripts/quickmodel.py index bb75b96..fde52f1 100644 --- a/scripts/quickmodel.py +++ b/scripts/quickmodel.py @@ -6,6 +6,9 @@ # or # python quickmodel.py --inputs 'inputs_spectra_example' --type 'spectra' +import matplotlib +matplotlib.use('Agg') + from assaytools import parser import matplotlib.pyplot as plt import string From 5e8b4dde69627aa0d03f78c41825d112ba1dd599 Mon Sep 17 00:00:00 2001 From: Sonya Hanson Date: Sat, 20 May 2017 17:38:15 -0400 Subject: [PATCH 2/2] changed delG hist range to be 1nm to 1mm --- scripts/quickmodel.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/quickmodel.py b/scripts/quickmodel.py index fde52f1..e895874 100644 --- a/scripts/quickmodel.py +++ b/scripts/quickmodel.py @@ -140,7 +140,7 @@ def quick_model(inputs, nsamples=1000, nthin=20): plt.axvline(x=DeltaG_map,color='black') plt.xlabel('$\Delta G$ ($k_B T$)',fontsize=16); plt.ylabel('$P(\Delta G)$',fontsize=16); - plt.xlim(-35,-10) + plt.xlim(-20,-8) hist_legend = mpatches.Patch(color=(0.7372549019607844, 0.5098039215686274, 0.7411764705882353), label = '$\Delta G$ = %.3g [%.3g,%.3g] $k_B T$' %(interval[1],interval[0],interval[2]) )