…, whittled down to 26 failing
…of multiple. Allows for 'lazy' grammars. Cleaned up FastaIO and SeqIO abit to reflect the new changes with using Role::IO.pm role however still needs a redesign
…d tests for the following private attribute getter/setter methods : end,rp,rg,publisher,editors,encoded_ref,doi,consortium and gb_reference
…ew method. Implemented hash_tree , type and alias method for text attribute
…nted more test and most are passing.
…ented p6 code in TypeManager. Made %type attribute into a public one for now in TypeManager. Passing more tests.
…The role is mostly just a shell so we have a common interface for Collection objects. Added attribute and method tagname to Collection.pm with also another multi method add_Annotation. Passing more tests as well.
…e at the moment. Passing more tests
…s otherwise it will not compile.
…ses. Added Bio::AnnotationI interface to all Annotation subclasses. Added a multi method add_Annotation for Collection.pm as well. Passing more tests.
…ion_keys is done. Added tagname method and attribute for Comment. Passing more tests and fixed some formatting of test file.
…ed get_Annotations method. Added tagname method and attribute for DBLink.pm. Uncommented more tests
…d to override it. Initial implementation of Comment and Reference Annotation classes. Just enough to get test passing. Added more tests
… basic tests as well.
…ng test file.
…ribute 'description'. Added a test.
…ame: id and display_id. Allowed in constructor both 'id' and 'display_id' to both initalize $!id. Same with 'desc' and 'description'
… and created getter/setter for seq attribute
… method. Fixed a bug where $min and $max would be initialized as match object and not integer. This causes issue where type constraints in method signature in Subseq. Passing the last test for PrimarySeq.t
…assing a few more test