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bcftools
examples
misc
win32
.gitignore
AUTHORS
COPYING
ChangeLog.old
INSTALL
Makefile
Makefile.mingw
NEWS
bam.c
bam.h
bam2bcf.c
bam2bcf.h
bam2bcf_indel.c
bam2depth.c
bam_aux.c
bam_cat.c
bam_color.c
bam_endian.h
bam_import.c
bam_index.c
bam_lpileup.c
bam_mate.c
bam_md.c
bam_pileup.c
bam_plcmd.c
bam_reheader.c
bam_rmdup.c
bam_rmdupse.c
bam_sort.c
bam_stat.c
bam_tview.c
bamshuf.c
bamtk.c
bedcov.c
bedidx.c
bgzf.c
bgzf.h
bgzip.c
cut_target.c
errmod.c
errmod.h
faidx.c
faidx.h
kaln.c
kaln.h
khash.h
klist.h
knetfile.c
knetfile.h
kprobaln.c
kprobaln.h
kseq.h
ksort.h
kstring.c
kstring.h
padding.c
phase.c
razf.c
razf.h
razip.c
sam.c
sam.h
sam_header.c
sam_header.h
sam_view.c
sample.c
sample.h
samtools.1