Code and data for Shahmoradi et al., Predicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design, J. Mol. Evol. 79:130–142 (2014).
R TeX Fortran Python Shell
Switch branches/tags
Nothing to show
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Failed to load latest commit information.
bfactors
correlation_analysis
crystal_rsa
entropies
evolutionary_rates
homologous_structures
manuscript
molecular_dynamics
protein_design
src
README.txt

README.txt

Raw data and analysis scripts to obtain them are in the following folders:
- crystal_rsa
- homologous_structures
- protein_design
- bfactors
- entropies
- evolutionary_rates
- molecular_dynamics

All analyses comparing multiple quantities, as well as all figures,
are in this folder:
- correlation_analysis

The manuscript is in this folder:
- manuscript