Clinico Omics in The Genius Medicine Consortium ( TGMC )

Repositories

• tservice

  Make research tool as a service in the biomedical research...
  Clojure 0 1 0 0 Updated Apr 15, 2021

• datains-frontend

  An out-of-box Pipeline Analyzer for sequencing data, e.g. RNA-Seq, WES, WGS etc.
  JavaScript MIT 0 1 0 11 Updated Apr 13, 2021

• quartet-rnaseq-report
  JavaScript MIT 0 0 0 0 Updated Apr 13, 2021

• tservice-quartet-plugins
  Clojure MIT 0 0 0 0 Updated Apr 6, 2021

• compose-services

  Docker compose for all sub-systems of clinico-omics platform.

  clinico-omics
  Lua 0 1 0 0 Updated Mar 21, 2021

• prophet-frontend
  Vue 0 0 0 9 Updated Mar 10, 2021

• csv-utils

  CSV Utility for Data Science, such as cbind, rbind, correlation...
  Clojure EPL-2.0 0 0 0 0 Updated Mar 2, 2021

• tservice-plugins

  A plugin repo for tservice system.
  Clojure MIT 0 1 0 0 Updated Mar 1, 2021

• dataseq-engine

  A query engine that lets you explore, visualize, discover omics data
  Clojure 0 0 0 0 Updated Feb 25, 2021

• datains

  Data integration service (Datains) for the Clinico Omics Platform.
  Clojure 0 1 0 0 Updated Feb 8, 2021

• preqc-pack

  To generate the required pre-evaluation indicators at one time...
  Rust 0 0 0 0 Updated Feb 1, 2021

• omics-tools

  A suite of programs for interacting with high-throughput sequencing data.
  Rust 0 0 0 0 Updated Jan 30, 2021

• exp2qcdt

  Convert expression table to qc data table for quartet project.
  R GPL-2.0 0 0 0 0 Updated Jan 22, 2021

• quartet-dnaseq-report
  JavaScript MIT 0 0 0 0 Updated Jan 19, 2021

• dataseq-core

  Omics Data Commons
  Clojure 0 0 0 0 Updated Jan 12, 2021

• data-model-viewer

  A viewer for data dictionary based on Windmill.
  JavaScript Apache-2.0 0 1 0 0 Updated Jan 12, 2021

• clj-antlr

  Forked from aphyr/clj-antlr

  Clojure bindings for the ANTLR 4 parser
  Clojure 27 0 0 0 Updated Jan 5, 2021

• charts

  Charts for visualization
  R 0 0 0 0 Updated Nov 23, 2020

• quartet-dna-vis
  R 1 0 0 0 Updated Nov 18, 2020

• Himashiny

  shiny for drawplot and analysis
  R 0 0 0 0 Updated Sep 2, 2020

• clj-filesystem

  An unified sdk for several object storage system.
  Clojure EPL-2.0 0 1 0 0 Updated Aug 29, 2020

• minio-clj

  Clojure Wrapper around Minio-java client
  Clojure EPL-1.0 0 0 0 0 Updated Aug 27, 2020

• oss-clj

  Clojure Wrapper around oss-java client
  Clojure EPL-1.0 0 0 0 0 Updated Aug 27, 2020

• nebula-importer

  Convert & import xlsx/csv file into nebula graph database. Based on vesoft-inc/nebula-importer.
  Go Apache-2.0 0 0 0 0 Updated Aug 11, 2020

• csv2sql

  A simple ETL tool to load CSVs in a directory tree into a SQL database (MySQL/PostgreSQL/SQLite).
  Clojure EPL-2.0 0 1 0 0 Updated Jul 30, 2020

• rnaseq-report
  JavaScript MIT 0 0 0 0 Updated Jul 15, 2020

• clinico-omics-workspace

  Forked from n8n-io/n8n

  Free and open fair-code licensed node based Workflow Automation Tool. Easily automate tasks across different services.
  TypeScript 1,137 0 0 0 Updated Jun 4, 2020

• metabase

  Forked from metabase/metabase

  The simplest, fastest way to get business intelligence and analytics to everyone in your company 😋
  Clojure 3,277 1 0 0 Updated May 22, 2020

• igv-webapp

  Forked from igvteam/igv-webapp

  IGV Web App
  JavaScript MIT 26 0 0 0 Updated Feb 13, 2020

• prophet

  Forked from doccano/doccano

  Open source text annotation tool for biomedical researcher.
  Python MIT 989 1 0 0 Updated Jan 4, 2020