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Pinned repositories

  1. elsiklab/sashimiplot

    A JBrowse plugin for creating sashimi or junction style plots from RNA-seq data

    JavaScript 6 1

  2. elsiklab/multibigwig

    A JBrowse plugin for plotting multiple bigwig subtracks

    JavaScript 7 1

  3. elsiklab/gwasviewer

    A JBrowse plugin for viewing GWAS data

    JavaScript 6

  4. mafviewer

    A JBrowse plugin to view multiple alignment format (MAF) files

    JavaScript 5 1

  5. travigraphjs

    A website to plot travis-CI build times

    JavaScript 4

  6. oddgenes

    A small database of really weird gene annotations

    17 2

1,113 contributions in the last year

Jul Aug Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Mon Wed Fri

Contribution activity

July 2018

Created a pull request in GMOD/jbrowse that received 3 comments

Add CSI index support for BAM and VCF

This adds support for using CSI indexes on BAM and VCF This allows doing coordinates of over a gigabase (or specifically 2^30 which is 1073741824) I…

+603 −235 3 comments

Created an issue in GMOD/jbrowse that received 2 comments

Create pseudogene glyph

The issue discussed in #1075 highlighted that representing pseudogenes is a little tricky Especially with a track that has both genes and pseudogen…

2 comments

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