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Merged
merged 6 commits into from
Dec 29, 2021
Merged

Release covidcast-indicators 0.2.18 #1441

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84e48f5
suppress sirCAL reporting from inds removed in Wave 12
nmdefries Dec 28, 2021
93b68fa
combine V15a/c logic properly
nmdefries Dec 28, 2021
be08fb1
comment describing V15abc inclusion by wave
nmdefries Dec 28, 2021
bf6b3c6
Merge pull request #1439 from cmu-delphi/vax-barrier-abc-fix
korlaxxalrok Dec 28, 2021
b762897
Merge pull request #1438 from cmu-delphi/discontinue-inds-wave12
korlaxxalrok Dec 28, 2021
6510183
chore: bump covidcast-indicators to 0.2.18
Dec 29, 2021
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2 changes: 1 addition & 1 deletion .bumpversion.cfg
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Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
[bumpversion]
current_version = 0.2.17
current_version = 0.2.18
commit = True
message = chore: bump covidcast-indicators to {new_version}
tag = False
4 changes: 4 additions & 0 deletions ansible/templates/sir_complainsalot-params-prod.json.j2
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Expand Up @@ -67,6 +67,10 @@
"smoothed_felt_isolated_7d", "smoothed_wfelt_isolated_7d",
"smoothed_worried_become_ill", "smoothed_wworried_become_ill",
"smoothed_received_2_vaccine_doses", "smoothed_wreceived_2_vaccine_doses",
"smoothed_hesitancy_reason_dislike_vaccines", "smoothed_whesitancy_reason_dislike_vaccines",
"smoothed_inperson_school_fulltime", "smoothed_winperson_school_fulltime",
"smoothed_inperson_school_parttime", "smoothed_winperson_school_parttime",
"smoothed_vaccinate_children", "smoothed_wvaccinate_children",
["smoothed_vaccine_barrier_appointment_time_tried", "msa"], ["smoothed_wvaccine_barrier_appointment_time_tried", "msa"],
["smoothed_vaccine_barrier_childcare_tried", "msa"], ["smoothed_wvaccine_barrier_childcare_tried", "msa"],
["smoothed_vaccine_barrier_document_tried", "msa"], ["smoothed_wvaccine_barrier_document_tried", "msa"],
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48 changes: 16 additions & 32 deletions facebook/delphiFacebook/R/variables.R
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Expand Up @@ -639,6 +639,12 @@ code_vaccines <- function(input_data, wave) {
input_data$v_worried_vaccine_side_effects <- NA_real_
}


# Wave V15a V15b V15c
# 11 Yes Yes No
# 12 No Yes Yes
#
# V15c replaces V15a as of Wave 12
if ( all(c("V15a", "V15b") %in% names(input_data)) ) {
# introduced in Wave 11
vaccine_barriers <- coalesce(input_data$V15a, input_data$V15b)
Expand All @@ -665,22 +671,10 @@ code_vaccines <- function(input_data, wave) {
input_data$v_vaccine_barrier_time <- is_selected(vaccine_barriers, "10")
input_data$v_vaccine_barrier_type <- is_selected(vaccine_barriers, "12")
input_data$v_vaccine_barrier_none <- is_selected(vaccine_barriers, "11")
} else {
input_data$v_vaccine_barrier_eligible <- NA
input_data$v_vaccine_barrier_no_appointments <- NA
input_data$v_vaccine_barrier_appointment_time <- NA
input_data$v_vaccine_barrier_technical_difficulties <- NA
input_data$v_vaccine_barrier_document <- NA
input_data$v_vaccine_barrier_technology_access <- NA
input_data$v_vaccine_barrier_travel <- NA
input_data$v_vaccine_barrier_language <- NA
input_data$v_vaccine_barrier_childcare <- NA
input_data$v_vaccine_barrier_time <- NA
input_data$v_vaccine_barrier_type <- NA
input_data$v_vaccine_barrier_none <- NA
}

if ( all(c("V15c", "V15b") %in% names(input_data)) ) {

input_data$v_vaccine_barrier_appointment_location <- NA
input_data$v_vaccine_barrier_other <- NA
} else if ( all(c("V15c", "V15b") %in% names(input_data)) ) {
# V15c introduced in Wave 12, replacing V15a with clarified wording.
vaccine_barriers <- coalesce(input_data$V15c, input_data$V15b)
vaccine_barriers <- ifelse(vaccine_barriers == "13", NA, vaccine_barriers)
Expand Down Expand Up @@ -713,6 +707,7 @@ code_vaccines <- function(input_data, wave) {
input_data$v_vaccine_barrier_time <- NA
input_data$v_vaccine_barrier_type <- NA
input_data$v_vaccine_barrier_none <- NA

input_data$v_vaccine_barrier_appointment_location <- NA
input_data$v_vaccine_barrier_other <- NA
}
Expand All @@ -733,22 +728,10 @@ code_vaccines <- function(input_data, wave) {
input_data$v_vaccine_barrier_time_has <- is_selected(vaccine_barriers, "10")
input_data$v_vaccine_barrier_type_has <- is_selected(vaccine_barriers, "12")
input_data$v_vaccine_barrier_none_has <- is_selected(vaccine_barriers, "11")
} else {
input_data$v_vaccine_barrier_eligible_has <- NA
input_data$v_vaccine_barrier_no_appointments_has <- NA
input_data$v_vaccine_barrier_appointment_time_has <- NA
input_data$v_vaccine_barrier_technical_difficulties_has <- NA
input_data$v_vaccine_barrier_document_has <- NA
input_data$v_vaccine_barrier_technology_access_has <- NA
input_data$v_vaccine_barrier_travel_has <- NA
input_data$v_vaccine_barrier_language_has <- NA
input_data$v_vaccine_barrier_childcare_has <- NA
input_data$v_vaccine_barrier_time_has <- NA
input_data$v_vaccine_barrier_type_has <- NA
input_data$v_vaccine_barrier_none_has <- NA
}

if ( "V15c" %in% names(input_data) ) {

input_data$v_vaccine_barrier_appointment_location_has <- NA
input_data$v_vaccine_barrier_other_has <- NA
} else if ( "V15c" %in% names(input_data) ) {
# V15c introduced in Wave 12, replacing V15a with clarified wording.
vaccine_barriers <- split_options(input_data$V15c)

Expand Down Expand Up @@ -779,6 +762,7 @@ code_vaccines <- function(input_data, wave) {
input_data$v_vaccine_barrier_time_has <- NA
input_data$v_vaccine_barrier_type_has <- NA
input_data$v_vaccine_barrier_none_has <- NA

input_data$v_vaccine_barrier_appointment_location_has <- NA
input_data$v_vaccine_barrier_other_has <- NA
}
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4 changes: 4 additions & 0 deletions sir_complainsalot/params.json.template
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Original file line number Diff line number Diff line change
Expand Up @@ -67,6 +67,10 @@
"smoothed_felt_isolated_7d", "smoothed_wfelt_isolated_7d",
"smoothed_worried_become_ill", "smoothed_wworried_become_ill",
"smoothed_received_2_vaccine_doses", "smoothed_wreceived_2_vaccine_doses",
"smoothed_hesitancy_reason_dislike_vaccines", "smoothed_whesitancy_reason_dislike_vaccines",
"smoothed_inperson_school_fulltime", "smoothed_winperson_school_fulltime",
"smoothed_inperson_school_parttime", "smoothed_winperson_school_parttime",
"smoothed_vaccinate_children", "smoothed_wvaccinate_children",
["smoothed_vaccine_barrier_appointment_time_tried", "msa"], ["smoothed_wvaccine_barrier_appointment_time_tried", "msa"],
["smoothed_vaccine_barrier_childcare_tried", "msa"], ["smoothed_wvaccine_barrier_childcare_tried", "msa"],
["smoothed_vaccine_barrier_document_tried", "msa"], ["smoothed_wvaccine_barrier_document_tried", "msa"],
Expand Down