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  1. Code to test Rt estimates against synthetic data

    R 15 12

  2. Python implementation of nonlinear embedding methods

    Python 9 6

  3. Code to accompany the manuscript "Age-specific differences in the dynamics of protective immunity to influenza"

    R 5 2

  4. Example code for deconvolving epidemic time series

    R 4 2

  5. Model of germinal center B-cell affinity maturation.

    C++ 2 2

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