@CobraLab

Computational Brain Anatomy Laboratory

Computational Brain Anatomy Laboratory, located in the CIC at the Douglas Institute, McGill University

Pinned repositories

  1. MAGeTbrain

    Multiple Automatically Generated Templates brain segmentation algorithm

    Python 18 17

  2. atlases

    Digital atlases

    Python 3 8

  3. minc-bpipe-library

    Library of bpipe implemented commands commonly applied to minc datafiles, suitable for importing into other pipelines

    Shell 5 6

  4. MINC-VM

    Packer built VMs with minc-toolkit and friends

    Shell 4

  • Shell 8 3 Updated Aug 16, 2018
  • Longitudinal Siamese Network for clinical trajectory prediction

    Jupyter Notebook 1 MIT Updated Aug 7, 2018
  • Multiple Automatically Generated Templates brain segmentation algorithm

    Python 18 17 Updated Aug 3, 2018
  • Website

    HTML 2,105 Updated Jul 30, 2018
  • A twolevel deformation based morphometry pipeline using ants

    Python Updated Jul 20, 2018
  • Shell Updated Jun 27, 2018
  • Library of bpipe implemented commands commonly applied to minc datafiles, suitable for importing into other pipelines

    Shell 5 6 Updated Jun 18, 2018
  • Packer built VMs with minc-toolkit and friends

    Shell 4 Updated Jun 14, 2018
  • Digital atlases

    Python 3 8 Updated Jun 12, 2018
  • Collection of tools to perform diffusion processing and tractography.

    Python 1 MIT Updated Jan 31, 2018
  • Perl Updated Jan 30, 2018
  • Extra miscellaneous scripts for minc-toolkit

    Perl Updated Jan 12, 2018
  • Playbooks for configuring CIC Workstations and Servers

    Shell 2 1 Updated Mar 16, 2017
  • Repository with Docker Build for MAGeTBrain

    Perl 1 Updated Aug 22, 2016
  • Python+Qt5 Interface for quickly quality-controlling arbitrary sets of images

    Python Updated Dec 3, 2015
  • Documentation for every thing, everything documented

    Shell 10 2 Updated May 17, 2015
  • Computes mean cortical thickness and total surface area from CIVET outputs using LPBA40 atlas

    Perl Updated Apr 28, 2015
  • Label-Fusion Method for MR image data

    Matlab 1 2 Updated Mar 16, 2015
  • Updated Jan 29, 2015
  • CSS Updated Oct 1, 2014
  • Repository for useful, possibly hacked, scripts

    Perl Updated Sep 24, 2014
  • Repo for tracking admin issues

    Updated Sep 6, 2014