{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":507852282,"defaultBranch":"main","name":"rnaseq","ownerLogin":"cokelaer","currentUserCanPush":false,"isFork":true,"isEmpty":false,"createdAt":"2022-06-27T09:53:44.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/778821?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1660293303.505111","currentOid":""},"activityList":{"items":[{"before":"9e13223f30365ecbd414694e0f55a9a9fb0bba04","after":"b793ac6e218c9849ae58827e4e8099fd773c990d","ref":"refs/heads/main","pushedAt":"2024-02-22T14:22:09.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix the default rRNA","shortMessageHtmlLink":"Fix the default rRNA"}},{"before":"22b2057cfd2e882b03b554f6ece699d0b6d1830e","after":"9e13223f30365ecbd414694e0f55a9a9fb0bba04","ref":"refs/heads/main","pushedAt":"2024-02-22T14:15:59.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix the default rRNA","shortMessageHtmlLink":"Fix the default rRNA"}},{"before":"5ca352285e9345943877e3a12302842008aa9020","after":"22b2057cfd2e882b03b554f6ece699d0b6d1830e","ref":"refs/heads/main","pushedAt":"2024-02-22T14:08:33.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix the default rRNA","shortMessageHtmlLink":"Fix the default rRNA"}},{"before":"266b6881387b022980bcecb1cc09de11782e0802","after":"5ca352285e9345943877e3a12302842008aa9020","ref":"refs/heads/main","pushedAt":"2023-12-14T15:31:57.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix typo for multiqc bowtie2 paired reports","shortMessageHtmlLink":"Fix typo for multiqc bowtie2 paired reports"}},{"before":"f959c555bed595422f751e1b95ddd4049e513f97","after":"266b6881387b022980bcecb1cc09de11782e0802","ref":"refs/heads/main","pushedAt":"2023-12-13T16:25:12.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix bowtie1 regression (log).\n\nenforce usage of --genome-directory (set to None)","shortMessageHtmlLink":"Fix bowtie1 regression (log)."}},{"before":"84ee640bc1432135d454fa7071aa93721a2f8052","after":"f959c555bed595422f751e1b95ddd4049e513f97","ref":"refs/heads/main","pushedAt":"2023-12-13T10:55:00.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Add rnaseqc container. cleanup rseqc section\n\nalso cleanup HTML report and added precommit","shortMessageHtmlLink":"Add rnaseqc container. cleanup rseqc section"}},{"before":"21f60b64c3a5a12ee52428cb164118ad6e7ce836","after":"84ee640bc1432135d454fa7071aa93721a2f8052","ref":"refs/heads/main","pushedAt":"2023-12-13T10:16:27.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Add rnaseqc container. cleanup rseqc section\n\nalso cleanup HTML report and added precommit","shortMessageHtmlLink":"Add rnaseqc container. cleanup rseqc section"}},{"before":"57abc2c249fac2ed2d182086d7ffce816862af43","after":"21f60b64c3a5a12ee52428cb164118ad6e7ce836","ref":"refs/heads/main","pushedAt":"2023-12-05T13:14:24.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Refactorisation to use click","shortMessageHtmlLink":"Refactorisation to use click"}},{"before":"130fe6ab12ea18c989f0a90a50ad84d2c3fc80b4","after":"57abc2c249fac2ed2d182086d7ffce816862af43","ref":"refs/heads/main","pushedAt":"2023-10-05T15:25:01.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix Annotation plot, add new expression plot","shortMessageHtmlLink":"Fix Annotation plot, add new expression plot"}},{"before":"091a92c5a67e47b0954a6757f8638e262fdbc714","after":"130fe6ab12ea18c989f0a90a50ad84d2c3fc80b4","ref":"refs/heads/main","pushedAt":"2023-09-26T20:43:29.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fixes #31 and #15","shortMessageHtmlLink":"Fixes sequana#31 and sequana#15"}},{"before":"f632cc2ab5432262fbd6ebf56661967d80230a7f","after":"091a92c5a67e47b0954a6757f8638e262fdbc714","ref":"refs/heads/main","pushedAt":"2023-09-26T20:40:43.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fixes #31 and #15","shortMessageHtmlLink":"Fixes sequana#31 and sequana#15"}},{"before":"3d84d00e5ad7311d0fbcadda4624c829354c75cb","after":"f632cc2ab5432262fbd6ebf56661967d80230a7f","ref":"refs/heads/main","pushedAt":"2023-09-20T10:48:29.000Z","pushType":"push","commitsCount":3,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fixes #31 and #15","shortMessageHtmlLink":"Fixes sequana#31 and sequana#15"}},{"before":"c5ef4e530aa8c525b630b59617e3adb137c01d08","after":"3d84d00e5ad7311d0fbcadda4624c829354c75cb","ref":"refs/heads/main","pushedAt":"2023-07-10T09:13:28.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"dd5cfd79bcb57d2ea556a5d0af8c01c607c48a3f","after":"c5ef4e530aa8c525b630b59617e3adb137c01d08","ref":"refs/heads/main","pushedAt":"2023-07-07T12:09:59.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"69b99e74236ea61dfcaaa9175f1ee61f71f62cb3","after":"dd5cfd79bcb57d2ea556a5d0af8c01c607c48a3f","ref":"refs/heads/main","pushedAt":"2023-07-07T11:53:45.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"b368e8a04cdd8fbd5a1bb64dcea488245343ba5f","after":"69b99e74236ea61dfcaaa9175f1ee61f71f62cb3","ref":"refs/heads/main","pushedAt":"2023-07-07T11:39:36.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"85b606b4173d451240b55c90845e872bca23ff85","after":"b368e8a04cdd8fbd5a1bb64dcea488245343ba5f","ref":"refs/heads/main","pushedAt":"2023-07-07T07:54:54.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"581b0eed5616b23edc55089be4612d7e1dc5bb4e","after":"85b606b4173d451240b55c90845e872bca23ff85","ref":"refs/heads/main","pushedAt":"2023-07-07T07:52:09.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"6581e4c1019866219678d3584644887ca6001eae","after":"581b0eed5616b23edc55089be4612d7e1dc5bb4e","ref":"refs/heads/main","pushedAt":"2023-07-07T07:35:22.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"525adad3b668716846bfa2fde1cb602801cf4614","after":"6581e4c1019866219678d3584644887ca6001eae","ref":"refs/heads/main","pushedAt":"2023-07-06T21:17:08.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"Fix options not used in star_mapping","shortMessageHtmlLink":"Fix options not used in star_mapping"}},{"before":"d35a4b9ac1eda105cfffc0c54cc7fe677462cd8a","after":"525adad3b668716846bfa2fde1cb602801cf4614","ref":"refs/heads/main","pushedAt":"2023-05-17T21:59:27.043Z","pushType":"push","commitsCount":4,"pusher":{"login":"cokelaer","name":"Thomas Cokelaer","path":"/cokelaer","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/778821?s=80&v=4"},"commit":{"message":"update new apptainer for graphviz","shortMessageHtmlLink":"update new apptainer for graphviz"}}],"hasNextPage":false,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEAhSWhAA","startCursor":null,"endCursor":null}},"title":"Activity ยท cokelaer/rnaseq"}