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  • cgpipe - minimum viable HPC pipeline

    Java BSD-3-Clause Updated Aug 28, 2018
  • Java companion programs for NGSUtils

    Java 3 1 BSD-3-Clause Updated Jul 8, 2018
  • Support utility classes for Java

    Java BSD-3-Clause Updated Jun 7, 2018
  • Server app for monitoring pipeline job progress

    Go BSD-3-Clause Updated Jan 31, 2018
  • Library for setting up and configuring command line programs

    Java BSD-3-Clause Updated Nov 2, 2017
  • Text processing utilities

    Java BSD-3-Clause Updated May 31, 2017
  • Simple Batch Scheduler - a single user job scheduler

    Python BSD-3-Clause Updated May 24, 2017
  • Simple Job Queue

    Java BSD-3-Clause Updated Apr 6, 2017
  • Web application for managing gene lists

    Python BSD-3-Clause Updated Feb 7, 2017
  • Cancer Genome Sequencing Utils

    Java BSD-3-Clause Updated Jun 2, 2016
  • Website for compgen.io

    HTML 1 Updated Apr 22, 2016
  • Splicing tools

    Java BSD-3-Clause Updated Mar 4, 2016
  • Command line downloader for files from Illumina's Basespace

    Go BSD-3-Clause Updated Dec 16, 2015
  • PIpelines for use with CGPipe

    BSD-3-Clause Updated Oct 29, 2015
  • Dockerfiles

    BSD-3-Clause Updated Oct 29, 2015
  • SQZ - file format for archiving raw genome sequencing data

    Java BSD-3-Clause Updated Oct 29, 2015