Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Continuous integration: regression test of every pipelines #14

Closed
sebastientourbier opened this issue Sep 12, 2019 · 0 comments
Closed

Continuous integration: regression test of every pipelines #14

sebastientourbier opened this issue Sep 12, 2019 · 0 comments
Labels

Comments

@sebastientourbier
Copy link
Member

@sebastientourbier sebastientourbier commented Sep 12, 2019

To make the release of the future versions more robust to changes in the source code, regression tests within CircleCI should cover the most typical use cases for each pipeline/ diffusion modality.

This would require the following tasks:

Sample dataset for test

  • Acquisition of sample MRI dataset including:
    • MPRAGE (T1W)
    • DSI
    • Resting-state fMRI
  • Conversion to BIDS dataset
  • Publish dataset to open platform (Zenodo)

Implementation of regression test

  • Update .circleci/config.yml:
    • Load new sample dataset
    • Run anatomical pipeline and diffusion pipeline on DSI data (Lausanne2018,SHORE,MRtrix3 Det. tracking)
    • Update expected outputs.txt in repo
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Linked pull requests

Successfully merging a pull request may close this issue.

1 participant
You can’t perform that action at this time.