Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.
Copy of now defunct https://github.com/eile/tclap with latest commit used by VARI-merge
Succinct Data Structure Library 2.0
STXXL: Standard Template Library for Extra Large Data Sets
Convenience repo for a collection of 6 reference genomes for E. coli strains.
Issue repository for Cosmo (separate until we can transfer issues between repositories nicely - ignore code)
Fast and frugal disk based k-mer counter
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