• Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.

    C++ 33 11 GPL-3.0 Updated Jan 22, 2018
  • Succinct Data Structure Library 2.0

    C++ 224 Updated Jun 23, 2016
  • stxxl

    Forked from stxxl/stxxl

    STXXL: Standard Template Library for Extra Large Data Sets

    C++ 58 BSL-1.0 Updated Jun 23, 2016
  • Convenience repo for a collection of 6 reference genomes for E. coli strains.

    Shell 1 Updated Jun 19, 2016
  • Issue repository for Cosmo (separate until we can transfer issues between repositories nicely - ignore code)

    C++ GPL-3.0 Updated Mar 7, 2016
  • CSS Updated Mar 7, 2016
  • Fast and frugal disk based k-mer counter

    C++ 25 Updated Feb 26, 2016

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