diff --git a/lineage_notes.txt b/lineage_notes.txt index 05771f9a..4697ed6a 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2792,6 +2792,8 @@ XBB.1.5.89 S:478R, S:554A, Canada/Italy/France XBB.1.5.90 S:P621S, ORF1ab:S6713L, Belgium/France, from #1849 XBB.1.5.91 S:P621S, USA XBB.1.5.92 ORF1a:T1168I, Ecuador +XBB.1.5.93 C337T, C19186T, USA +HD.1 Alias of XBB.1.5.93.1, S:T346I, USA/Dominican Republic XBB.1.6 USA, S:L216F, S:H146K, from issue #1428 XBB.1.7 USA-NY, S:V608I XBB.1.8 Denmark, S:186insSGG, C3241T diff --git a/lineages.csv b/lineages.csv index 1e2e6d25..0551c855 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2244459,7 +2244459,6 @@ USA/NC-CORVASEQ-1085-9390/2023,XBB.1.5 USA/NJ-CDC-LC1005970/2023,XBB.1.5 USA/SC-CDC-QDX45960950/2023,XBB.1.5 Australia/NSW-NSWHP-41832/2023,XBB.1.5 -USA/OH-CDC-VSX-A061636/2023,XBB.1.5 USA/FL-CDC-QDX46136469/2023,XBB.1.5 England/QEUH-326F2C86/2023,XBB.1.5 Denmark/DCGC-642488/2023,XBB.1.5 @@ -2245880,7 +2245879,6 @@ USA/VA-VTVAS3-GSC42242/2023,XBB.1.5 USA/NY-CDC-LC0958989/2022,XBB.1.5 Germany/BW-RKI-I-1105697/2023,XBB.1.5 USA/MD-CDC-LC1021260/2023,XBB.1.5 -USA/KY-CDC-QDX46679051/2023,XBB.1.5 USA/TX-ASC-210994847/2023,XBB.1.5 England/PLYM-326AB2F3/2023,XBB.1.5 USA/MA-CDCBI-CRSP_Z2XXUQAHNI6PCAYQ/2023,XBB.1.5 @@ -2248924,7 +2248922,6 @@ USA/PA-CDC-QDX46944999/2023,XBB.1.5 USA/NJ-CDC-QDX46611534/2023,XBB.1.5 USA/UT-UPHL-230106756487/2022,XBB.1.5 USA/TX-CDC-QDX47311963/2023,XBB.1.5 -USA/OH-CDC-VSX-A062207/2023,XBB.1.5 USA/MA-CDCBI-CRSP_HPHUB2LH5JSXQEU4/2023,XBB.1.5 USA/VA-CAV_VAS3N_00017801_01/2023,XBB.1.5 USA/CA-CDC-QDX45639443/2023,XBB.1.5 @@ -2249873,7 +2249870,6 @@ Netherlands/NB-MVD-C2300247/2023,XBB.1.5 USA/MI-CDC-QDX46612372/2023,XBB.1.5 USA/DC-CDC-2-6790724/2023,XBB.1.5 Canada/ON-PHL-23-09638/2023,XBB.1.5 -USA/OH-CDC-QDX46137148/2023,XBB.1.5 USA/HI-H2320120/2023,XBB.1.5 Canada/QC-L00589506001/2023,XBB.1.5 USA/NJ-CDC-LC1002651/2023,XBB.1.5 @@ -2436270,3 +2436266,80 @@ CostaRica/INC-11252-793759/2023,XBB.1.5.92 CostaRica/INC-11326-794323/2023,XBB.1.5.92 CostaRica/INC-11273-794109/2023,XBB.1.5.92 CostaRica/INC-11257-793770/2023,XBB.1.5.92 +Canada/AB-ABPHL-94244/2023,XBB.1.5.93 +USA/IL-CDC-VSX-A063229/2023,XBB.1.5.93 +USA/OH-CDC-QDX49007123/2023,XBB.1.5.93 +USA/OH-CDC-QDX46230244/2023,XBB.1.5.93 +USA/IL-CDC-QDX45962725/2023,XBB.1.5.93 +USA/CT-Yale-24495/2023,XBB.1.5.93 +USA/OH-CDC-QDX46137148/2023,XBB.1.5.93 +USA/FL-CDC-QDX47771671/2023,XBB.1.5.93 +USA/FL-CDC-QDX47492825/2023,XBB.1.5.93 +USA/KY-CDC-QDX46679051/2023,XBB.1.5.93 +USA/OH-CDC-QDX46179569/2023,XBB.1.5.93 +USA/OH-CDC-QDX46448962/2023,XBB.1.5.93 +USA/OH-CDC-QDX46327782/2023,XBB.1.5.93 +USA/OH-CDC-QDX46327784/2023,XBB.1.5.93 +France/GES-IPP08610/2023,XBB.1.5.93 +USA/VA-CDC-LC1030343/2023,XBB.1.5.93 +USA/OH-CDC-VSX-A062207/2023,XBB.1.5.93 +USA/OH-CDC-VSX-A061636/2023,XBB.1.5.93 +USA/OH-CDC-VSX-A073690/2023,XBB.1.5.93 +USA/OH-CDC-QDX48247515/2023,XBB.1.5.93 +USA/OH-CDC-QDX48193369/2023,XBB.1.5.93 +USA/OH-CDC-QDX48144008/2023,XBB.1.5.93 +USA/OH-CDC-QDX47492854/2023,XBB.1.5.93 +USA/OH-CDC-QDX48551723/2023,XBB.1.5.93 +USA/NY-Wadsworth-015406-01/2023,XBB.1.5.93 +USA/OH-CDC-QDX49399636/2023,XBB.1.5.93 +USA/OH-CDC-LC1033027/2023,XBB.1.5.93 +USA/OH-PLMI-HFVYF-18191/2023,XBB.1.5.93 +USA/OH-CDC-QDX49551891/2023,XBB.1.5.93 +USA/OH-PLMI-HFWHT-18866/2023,XBB.1.5.93 +USA/OH-PLMI-HFWHT-18898/2023,XBB.1.5.93 +USA/OH-UHTL-3159/2023,XBB.1.5.93 +USA/OH-PLMI-HH3KL-19645/2023,XBB.1.5.93 +USA/OH-PLMI-HHF35-19348/2023,XBB.1.5.93 +USA/OH-PLMI-HHF3C-19024/2023,XBB.1.5.93 +USA/OH-PLMI-HHF3C-19045/2023,XBB.1.5.93 +USA/OH-PLMI-HHF3C-19021/2023,XBB.1.5.93 +USA/GA-CDC-QDX46944418/2023,XBB.1.5.93 +USA/OH-CDC-QDX46678913/2023,XBB.1.5.93 +Japan/TKYkbm88300/2023,XBB.1.5.93 +Japan/PG-466123/2023,XBB.1.5.93 +USA/OH-CDC-QDX80017624/2023,XBB.1.5.93 +USA/CA-CDPH-500111229/2023,XBB.1.5.93 +DominicanRepublic/2149950-LNSPDD/2023,XBB.1.5.93 +USA/TX-CDC-QDX48685274/2023,XBB.1.5.93 +USA/TN-SPHL-9316/2023,XBB.1.5.93 +USA/NY-CDC-QDX80565074/2023,XBB.1.5.93 +PuertoRico/PR-PRPHL-MB0423/2023,XBB.1.5.93 +USA/CA-HLX-STM-368YYF4G3/2023,XBB.1.5.93 +USA/FL-CDC-VSX-A065918/2023,XBB.1.5.93 +USA/CA-CDC-QDX48956609/2023,XBB.1.5.93 +USA/PA-CDC-QDX48464012/2023,XBB.1.5.93 +USA/CA-CDC-QDX48637147/2023,XBB.1.5.93 +USA/AZ-ASU100933/2023,XBB.1.5.93 +Canada/QC-L00623482001/2023,XBB.1.5.93 +Canada/QC-L00623023001/2023,XBB.1.5.93 +Austria/AGES-1138696/2023,XBB.1.5.93 +USA/CT-CDC-QDX80465070/2023,XBB.1.5.93 +USA/MN-MDH-35666/2023,XBB.1.5.93 +USA/WI-WSLH-2300918/2023,XBB.1.5.93 +USA/NC-CDC-LC1038071/2023,XBB.1.5.93 +USA/FL-CDC-LC1038063/2023,XBB.1.5.93 +USA/VA-CDC-LC1038064/2023,XBB.1.5.93 +DominicanRepublic/2147204-LNSPDD/2023,HD.1 +DominicanRepublic/2146123-LNSPDD/2023,HD.1 +DominicanRepublic/2147203-LNSPDD/2023,HD.1 +USA/NY-CDC-LC1043480/2023,HD.1 +DominicanRepublic/2146008-LNSPDD/2023,HD.1 +USA/OH-PLMI-HJGT3-20358/2023,HD.1 +USA/CA-CDC-QDX81608178/2023,HD.1 +DominicanRepublic/2145343-LNSPDD/2023,HD.1 +USA/NY-CDC-QDX80138219/2023,HD.1 +DominicanRepublic/2149668-LNSPDD/2023,HD.1 +DominicanRepublic/2149809-LNSPDD/2023,HD.1 +USA/NJ-GBW-H10-013-1488/2023,HD.1 +DominicanRepublic/2147711-LNSPDD/2023,HD.1 +DominicanRepublic/2147705-LNSPDD/2023,HD.1 diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index d5ab4c83..dc30ca20 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -180,6 +180,7 @@ "HA": "XBB.1.5.86", "HB": "XBB.1.34.2", "HC": "XBB.1.5.44", + "HD": "XBB.1.5.93", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],