From 2797d5f0439705b07a383de6ce1e853f5597d92a Mon Sep 17 00:00:00 2001 From: InfrPopGen Date: Fri, 14 Apr 2023 14:24:28 +0100 Subject: [PATCH] Added new recombinant lineage XCB from #1668 with 46 new sequence designations, and 0 updated --- lineage_notes.txt | 1 + lineages.csv | 46 ++++++++++++++++++++++++++++++++ pango_designation/alias_key.json | 3 ++- 3 files changed, 49 insertions(+), 1 deletion(-) diff --git a/lineage_notes.txt b/lineage_notes.txt index 8c634b68..c328681d 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2771,6 +2771,7 @@ XBW Recombinant lineage of XBB.1.5, BQ.1.14, from issue #1505 XBY Recombinant lineage of BR.2.1, XBF, from issue #1669 XBZ Recombinant lineage of BA.5.2* and EF.1.3, predominantly in Denmark, Germany and Austria, from pango-designation issue #1666 XCA Recombinant lineage of BA.2.75* and BQ.1*, predominantly in UK, from pango-designation issue #1752 +XCB Recombinant lineage of BF.31.1and BQ.1.10*, predominantly in Chile, from pango-designation issue #1668 *A.2.1 Withdrawn: Lineage with sequences predominantly from Panama *A.8 Withdrawn: Indian lineage merged with A.9 *A.10 Withdrawn: Spanish lineage reassigned to A.5 diff --git a/lineages.csv b/lineages.csv index 31be15b7..f3fc06f9 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2365014,3 +2365014,49 @@ USA/NJ-GBW-H20-297-4199/2023,XBB.2.3.5 India/MH-NIV-940/2023,XBB.2.3.5 USA/CA-GBW-H10-010-8064/2023,XBB.2.3.5 USA/NJ-GBW-H20-282-3800/2023,XBB.2.3.5 +Chile/BI-ISPC-22335/2023,XCB +Chile/NB-378/2022,XCB +Chile/NB-14498/2023,XCB +Chile/NB-4906/2023,XCB +Chile/NB-18249/2023,XCB +Chile/NB-3082/2023,XCB +Chile/NB-3615/2023,XCB +Chile/NB-12557/2023,XCB +Chile/AR-11870/2023,XCB +Chile/NB-13173/2023,XCB +Chile/NB-13170/2023,XCB +Chile/NB-8154/2023,XCB +Chile/NB-14497/2023,XCB +Chile/CO-20739/2023,XCB +Chile/NB-7864/2023,XCB +Chile/LR-21566/2023,XCB +Chile/NB-7223/2023,XCB +Chile/NB-ISPC-10771/2023,XCB +Chile/NB-ISPC-10780/2023,XCB +Chile/RM-15679/2023,XCB +Chile/NB-1050/2023,XCB +Chile/LR-ISPC-22442/2023,XCB +Chile/NB-8834/2023,XCB +Chile/NB-7870/2023,XCB +Chile/NB-12560/2023,XCB +Chile/NB-22076/2023,XCB +Chile/NB-9436/2023,XCB +Chile/NB-7218/2023,XCB +Chile/NB-7222/2023,XCB +Chile/NB-15315/2023,XCB +Chile/BI-ISPC-22328/2023,XCB +Chile/ML-5922/2023,XCB +Chile/NB-7866/2023,XCB +Chile/BI-11921/2023,XCB +Chile/NB-3613/2023,XCB +Chile/NB-8838/2023,XCB +Chile/NB-8833/2023,XCB +Chile/NB-21326/2023,XCB +Chile/RM-ISPC-11859/2023,XCB +Chile/NB-ISPC-10775/2023,XCB +Chile/NB-9439/2023,XCB +Chile/LR-21560/2023,XCB +Chile/NB-7220/2023,XCB +Chile/NB-9440/2023,XCB +Chile/LR-23330/2023,XCB +Chile/NB-23280/2023,XCB diff --git a/pango_designation/alias_key.json b/pango_designation/alias_key.json index 2744c1da..5147fdbe 100644 --- a/pango_designation/alias_key.json +++ b/pango_designation/alias_key.json @@ -214,6 +214,7 @@ "XBW": ["XBB.1.5","BQ.1.14"], "XBY": ["BR.2.1","XBF"], "XBZ": ["BA.5.2*","EF.1.3"], - "XCA": ["BA.2.75*","BQ.1*"] + "XCA": ["BA.2.75*","BQ.1*"], + "XCB": ["BF.31.1","BQ.1.10*"] }