diff --git a/lineage_notes.txt b/lineage_notes.txt index 6fb7b444..7091038e 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -3121,6 +3121,7 @@ XCC Recombinant lineage of CH.1.1.1 and XBB.1.9.1, predominantly Pakistan, Austr XCD Recombinant lineage of XBB.1* and BQ.1.1.25*, with S:R214H, S:478I, Indonesia, from #2042 XCE Recombinant lineage of BQ.1* and FY.1 (XBB.1.22.1.1), Indonesia, South Korea, France, from lineage-proposals#123 XCF Recombinant lineage of XBB* and FE.1 (XBB.1.18.1.1), possibly South America, from lineage-proposals#2 +XCF.1 S:F157L, USA XCG Recombinant lineage of BA.5.2* and XBB.1, Mexico *A.2.1 Withdrawn: Lineage with sequences predominantly from Panama *A.8 Withdrawn: Indian lineage merged with A.9 diff --git a/lineages.csv b/lineages.csv index abab3afb..1b9d907a 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2414118,10 +2414118,6 @@ USA/NY-CDC-QDX48586965/2023,XCF USA/PA-CDC-LC1038837/2023,XCF USA/MN-MDH-35536/2023,XCF USA/MD-CDC-LC1042111/2023,XCF -USA/CA-CDC-LC1038686/2023,XCF -USA/VA-CDC-LC1039948/2023,XCF -USA/MS-CDC-VSX-A079750/2023,XCF -USA/TN-CDC-LC1039980/2023,XCF Reunion/ChuReu-723011937701/2023,BQ.1.1.75 Reunion/ChuReu-723010340101/2022,BQ.1.1.75 Reunion/ChuReu-723010340001/2022,BQ.1.1.75 @@ -2435771,3 +2435767,17 @@ Heilongjiang/HLJCDC-1178/2023,FL.2.4 Heilongjiang/HLJCDC-1310/2023,FL.2.4 CHN/HLJCDC-1367/2023,FL.2.4 CHN/HLJCDC-1356/2023,FL.2.4 +USA/CA-CDC-LC1038686/2023,XCF.1 +USA/VA-CDC-LC1039948/2023,XCF.1 +USA/CA-CDPH-6000015524/2023,XCF.1 +USA/MS-CDC-VSX-A079750/2023,XCF.1 +USA/TN-CDC-LC1039980/2023,XCF.1 +France/ARA-HCL-723000816001/2023,XCF.1 +Italy/APU-IZSPB-PT8038/2023,XCF.1 +USA/NC-CDC-QDX81064652/2023,XCF.1 +France/BFC-IPP15156/2023,XCF.1 +USA/NV-CDC-QDX80783961/2023,XCF.1 +USA/NV-CDC-QDX80783963/2023,XCF.1 +USA/WA-GBW-H10-014-6741/2023,XCF.1 +USA/HI-H2322452/2023,XCF.1 +USA/WA-GBW-H20-315-7167/2023,XCF.1