diff --git a/lineage_notes.txt b/lineage_notes.txt index 67379910..cfcf7df6 100644 --- a/lineage_notes.txt +++ b/lineage_notes.txt @@ -2583,6 +2583,7 @@ EK.3 Alias of XBB.1.5.13.3, S:P251S, Scotland/England/Ireland XBB.1.5.14 C2695T, Europe/US EL.1 Alias of XBB.1.5.14.1, S:Q675H, Europe, from #1631 XBB.1.5.15 G15957T, USA +FD.1 Alias of XBB.1.5.15.1, ORF7b:E3*, England/Canada XBB.1.5.16 T14766C, USA XBB.1.5.17 C23635T, USA XBB.1.5.18 ORF1a:T2300I, England/Europe diff --git a/lineages.csv b/lineages.csv index d3a8c7f8..4e17e949 100644 --- a/lineages.csv +++ b/lineages.csv @@ -2226352,40 +2226352,6 @@ USA/PA-CDC-LC0990951/2023,XBB.1.5.15 NewZealand/23ZA0897/2023,XBB.1.5.15 NewZealand/23ZA0896/2023,XBB.1.5.15 USA/DE-CDC-LC0997389/2023,XBB.1.5.15 -England/BRBR-326B73F1/2023,XBB.1.5.15 -England/BRBR-326B80BD/2023,XBB.1.5.15 -England/BRBR-326B9F55/2023,XBB.1.5.15 -England/PHEC-YYERB5A/2023,XBB.1.5.15 -India/GJ-INSACOG-GBRC10252/2023,XBB.1.5.15 -England/QEUH-32682025/2022,XBB.1.5.15 -England/PHEC-YYEDCR6/2023,XBB.1.5.15 -England/QEUH-326C66BA/2023,XBB.1.5.15 -England/PHEC-YY89IMX/2023,XBB.1.5.15 -Ireland/L-Enfer-060123008_D4/2023,XBB.1.5.15 -England/PHEP-YYGK5MI/2023,XBB.1.5.15 -England/PHEC-YYEDKQC/2023,XBB.1.5.15 -England/LSPA-3267F3AA/2022,XBB.1.5.15 -Canada/QC-LSPQ-L00584788001/2023,XBB.1.5.15 -Canada/QC-L00577851001/2023,XBB.1.5.15 -Canada/QC-L00586379001/2023,XBB.1.5.15 -Canada/QC-L00586373001/2023,XBB.1.5.15 -Canada/QC-LSPQ-L00584454001/2023,XBB.1.5.15 -Canada/QC-LSPQ-L00584106001/2023,XBB.1.5.15 -Canada/QC-LSPQ-L00584681001/2023,XBB.1.5.15 -Canada/QC-L00582363001/2023,XBB.1.5.15 -Canada/NB-CHUDGLD-050223-MM00083R/2023,XBB.1.5.15 -Australia/NSW-ICPMR-42433/2023,XBB.1.5.15 -Australia/NSW-ICPMR-42543/2023,XBB.1.5.15 -England/BRBR-326CF824/2023,XBB.1.5.15 -England/QEUH-326CBC1D/2023,XBB.1.5.15 -USA/NY-NYULH10465/2023,XBB.1.5.15 -Scotland/QEUH-326CC98E/2023,XBB.1.5.15 -Scotland/BRBR-326C9D58/2023,XBB.1.5.15 -England/PHEC-YYENREY/2023,XBB.1.5.15 -England/PHEC-YYENA1Z/2023,XBB.1.5.15 -England/PHEC-YYEN6FC/2023,XBB.1.5.15 -England/PHEC-YYEN6JR/2023,XBB.1.5.15 -England/PHEC-YYENYQA/2023,XBB.1.5.15 USA/NC-ECU-117076622/2023,XBB.1.5.15 USA/NC-ECU-117079256/2023,XBB.1.5.15 USA/NY-PRL-221216_00E20/2022,XBB.1.5.15 @@ -2354088,7 +2354054,6 @@ Peru/CUS-INS-41046/2022,BQ.1.1.72 Peru/LIM-INS-40618/2022,BQ.1.1.72 Peru/PUN-INS-37981/2022,BQ.1.1.72 Peru/PUN-INS-37980/2022,BQ.1.1.72 -strain,FC.1 Indonesia/JK-Undip-NIHRD-WGS-00036/2022,FC.1 Indonesia/JT-Undip-00342/2022,FC.1 Indonesia/JT-Undip-00349/2022,FC.1 @@ -2354176,3 +2354141,158 @@ SouthKorea/KDCA205900/2023,FC.1 Indonesia/JK-CW62-3711/2022,FC.1 Indonesia/JI-ITD-60320NT/2022,FC.1 Indonesia/JK-NIHRD-ITB-N1909/2022,FC.1 +England/BRBR-326E1200/2023,FD.1 +England/BRBR-326E12E2/2023,FD.1 +England/BRBR-326E1A35/2023,FD.1 +England/BRBR-326E0D88/2023,FD.1 +England/PHEC-YYEJ5RD/2023,FD.1 +England/PHEP-YYGXGTU/2023,FD.1 +England/QEUH-32682025/2022,FD.1 +England/BRBR-326E12A6/2023,FD.1 +England/BRBR-326FE0D9/2023,FD.1 +England/PHEP-YYGXGXA/2023,FD.1 +England/BRBR-326E119A/2023,FD.1 +England/QEUH-326CBC68/2023,FD.1 +England/BRBR-326D6D58/2023,FD.1 +England/BRBR-326D6C97/2023,FD.1 +England/QEUH-326C66BA/2023,FD.1 +England/PHEC-YY89IMX/2023,FD.1 +England/BRBR-326FE6E6/2023,FD.1 +India/GJ-INSACOG-GBRC10252/2023,FD.1 +England/BRBR-326B9F55/2023,FD.1 +England/BRBR-326D6E0A/2023,FD.1 +England/BRBR-326D6DEF/2023,FD.1 +England/BRBR-326D6DD0/2023,FD.1 +England/BRBR-326B80BD/2023,FD.1 +England/BRBR-326D6D85/2023,FD.1 +England/PHEC-YYERB5A/2023,FD.1 +England/BRBR-326D6DA3/2023,FD.1 +England/BRBR-326DAAD5/2023,FD.1 +England/BRBR-326DA8DB/2023,FD.1 +England/BRBR-326DA9BA/2023,FD.1 +England/BRBR-326DB1A2/2023,FD.1 +England/BRBR-326E14FB/2023,FD.1 +England/BRBR-326E00CB/2023,FD.1 +England/BRBR-326E0CF4/2023,FD.1 +England/BRBR-326B73F1/2023,FD.1 +England/BRBR-326DD8BA/2023,FD.1 +England/PHEC-YYEDCR6/2023,FD.1 +England/PHEC-YYEJ9Y8/2023,FD.1 +England/PHEC-YYE8F9G/2023,FD.1 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b/pango_designation/alias_key.json @@ -134,6 +134,7 @@ "FA": "B.1.1.529.5.3.1.1.1.1.1.1.10", "FB": "B.1.1.529.5.3.1.1.1.1.1.2.1", "FC": "B.1.1.529.5.3.1.1.1.1.1.1.72", + "FD": "XBB.1.5.15", "XA": ["B.1.1.7","B.1.177"], "XB": ["B.1.634","B.1.631"], "XC": ["AY.29","B.1.1.7"],