Skip to content

covid-19-Re/dailyRe-Data

master
Switch branches/tags

Name already in use

A tag already exists with the provided branch name. Many Git commands accept both tag and branch names, so creating this branch may cause unexpected behavior. Are you sure you want to create this branch?
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
 
 
 
 

Daily Re for select countries

See https://ibz-shiny.ethz.ch/covid-19-re-international/ for an interactive visualisation of the data.

See https://www.medrxiv.org/content/10.1101/2020.11.26.20239368v1.article-info for an explanation of the method used.

Data Format

Data is provided as a csv per country named with the countries alpha-3 code + `-estimates.csv``

The data contains the following columns:

column name value description
country string country name
region string region (e.g. Province, Canton etc.)
source string data source abbreviation (see dataSources.csv)
data_type string Data type on which the estimation is based on
estimate_type string Estimation type (sliding window or step-wise)
date string, YYYY-MM-DD Date
median_R_mean float mean estimated median Re
median_R_highHPD float upper bound of the 95% confidence interval
median_R_lowHPD float lower bound of the 95% confidence interval
countryIso3 string alpha-3 country code

About

daily SARS-CoV2 Re Values for select countries. See https://ibz-shiny.ethz.ch/covid-19-re/ for interactive visualisations.

Topics

Resources

License

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published