{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":247022658,"defaultBranch":"master","name":"Slicer","ownerLogin":"cpinter","currentUserCanPush":false,"isFork":true,"isEmpty":false,"createdAt":"2020-03-13T08:29:00.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/1325980?v=4","public":true,"private":false,"isOrgOwned":false},"refInfo":{"name":"","listCacheKey":"v0:1698669425.0","currentOid":""},"activityList":{"items":[{"before":"e4cf2b408b3912ae8267571f6bd7c242f69a3313","after":"f055fe4bf9f6ac17bd895a3438d05e2d82a85f04","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-06-17T14:00:04.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Minor code clean up","shortMessageHtmlLink":"ENH: Minor code clean up"}},{"before":"c49ef95634ea7bb021b2ae999f5160b8a3d5d048","after":"e4cf2b408b3912ae8267571f6bd7c242f69a3313","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-06-06T14:31:15.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Add RasToIjk matrix to image sequence reader","shortMessageHtmlLink":"ENH: Add RasToIjk matrix to image sequence reader"}},{"before":"0850a9d6d72eb326a5c769ffaf58bfa99331d0b9","after":"c49ef95634ea7bb021b2ae999f5160b8a3d5d048","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-06-04T11:14:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Make sure direction matrix is all defined","shortMessageHtmlLink":"ENH: Make sure direction matrix is all defined"}},{"before":"7f5be22cdd6a5171e75cb93abaded456f7a3ec7a","after":"0850a9d6d72eb326a5c769ffaf58bfa99331d0b9","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-05-29T10:08:59.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Basic 5D image sequence reading works","shortMessageHtmlLink":"ENH: Basic 5D image sequence reading works"}},{"before":"c1c3e852bfcd7c4778ab7ff9c44cfd3437f43596","after":"7f5be22cdd6a5171e75cb93abaded456f7a3ec7a","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-05-22T14:27:10.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Basic 5D image sequence reading works","shortMessageHtmlLink":"ENH: Basic 5D image sequence reading works"}},{"before":"00aeb4c5e0cff96885ddf31269211f2e80435e13","after":"c1c3e852bfcd7c4778ab7ff9c44cfd3437f43596","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-05-06T11:54:48.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Add first prototype of vtkITKImageSequenceReader\n\nIt is hard-coded to the test input sequence image, and the output is not yet propagated to MRML.","shortMessageHtmlLink":"ENH: Add first prototype of vtkITKImageSequenceReader"}},{"before":"9ba368f0d9385b490a8b9b03c479a0fcd8462247","after":"00aeb4c5e0cff96885ddf31269211f2e80435e13","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-02-28T14:11:14.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"STYLE: Follow Slicer style changes after rebase","shortMessageHtmlLink":"STYLE: Follow Slicer style changes after rebase"}},{"before":"0b13819e7fec3d4d54f1048c25858e22d4911f74","after":"9ba368f0d9385b490a8b9b03c479a0fcd8462247","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-02-15T15:46:04.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"DOC: Fix obsolete comment in archetype image series reader header","shortMessageHtmlLink":"DOC: Fix obsolete comment in archetype image series reader header"}},{"before":"b8f3cb574143f22cf4d71b295e174620641b026d","after":"0b13819e7fec3d4d54f1048c25858e22d4911f74","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-01-30T12:04:17.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Handle VoxelVectorType in image sequence writer\n\nThe writer vtkITKImageSequenceWriter now handles the voxel vector type of the images in the input sequence.\nFixed mistakes in voxel vector type enum converter utility functions in vtkMRMLVolumeArchetypeStorageNode (the function names and their contents were mixed up, as well as the default return value in ConvertVoxelVectorTypeMRMLToVTKITK).","shortMessageHtmlLink":"ENH: Handle VoxelVectorType in image sequence writer"}},{"before":"962474fb9528686914de3936d9139c5a8984f0a1","after":"b8f3cb574143f22cf4d71b295e174620641b026d","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2024-01-29T15:08:19.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Handle VoxelVectorType in image sequence writer\n\nThe writer vtkITKImageSequenceWriter now handles the voxel vector type of the images in the input sequence.\nFixed mistakes in voxel vector type enum converter utility functions in vtkMRMLVolumeArchetypeStorageNode (the function names and their contents were mixed up, as well as the default return value in ConvertVoxelVectorTypeMRMLToVTKITK).","shortMessageHtmlLink":"ENH: Handle VoxelVectorType in image sequence writer"}},{"before":"712ebe453fdbd4752a842c94cacc8988624d38ea","after":"962474fb9528686914de3936d9139c5a8984f0a1","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2023-11-30T14:28:26.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"STYLE: Remove commented out old code","shortMessageHtmlLink":"STYLE: Remove commented out old code"}},{"before":"22ad8a3416e2a64100615b5dbad9ebc88c9e9dd3","after":"712ebe453fdbd4752a842c94cacc8988624d38ea","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2023-11-30T14:26:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"STYLE: Remove commented out old code","shortMessageHtmlLink":"STYLE: Remove commented out old code"}},{"before":"1aa002c4d751ccdbbb7d0f6db7cdd4beed629e6b","after":"22ad8a3416e2a64100615b5dbad9ebc88c9e9dd3","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2023-11-30T13:48:29.000Z","pushType":"push","commitsCount":5,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Sequence saving to image works in 5D for test case\n\nThe test case is: 5 RGBA image of 320x320x1\n\nThe output NRRD header:\nNRRD0004\n# Complete NRRD file format specification at:\n# http://teem.sourceforge.net/nrrd/format.html\ntype: unsigned char\ndimension: 5\nspace dimension: 4\nsizes: 4 320 320 1 5\nspace directions: none (1,0,0,0) (0,1,0,0) (0,0,1,0) (0,0,0,1.0185579796238055e-313)\nkinds: vector domain domain domain domain\nencoding: gzip\nspace origin: (0,0,0,1)","shortMessageHtmlLink":"ENH: Sequence saving to image works in 5D for test case"}},{"before":"be9ecf4c159b69aa2c0954723db94c1a45161408","after":"6bcff1037933c00c0ec5e3c0d9b20216c11fd49d","ref":"refs/heads/sh-attribute-filter-deprecation","pushedAt":"2023-11-15T17:58:57.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"jcfr","name":"Jean-Christophe Fillion-Robin","path":"/jcfr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/219043?s=80&v=4"},"commit":{"message":"DOC: Improve documentation of obsolete filtering API in SH proxy model\n\nRe https://discourse.slicer.org/t/problems-filtering-subject-hierarchy-tree/32435/5\n\nCo-authored-by: James Butler ","shortMessageHtmlLink":"DOC: Improve documentation of obsolete filtering API in SH proxy model"}},{"before":"009c3137b5d85f2e12337f84ed34cfb24723caa7","after":"be9ecf4c159b69aa2c0954723db94c1a45161408","ref":"refs/heads/sh-attribute-filter-deprecation","pushedAt":"2023-11-07T10:43:40.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Add deprecation warning for old attribute filter in SH proxy model\n\nRe https://discourse.slicer.org/t/problems-filtering-subject-hierarchy-tree/32435/5","shortMessageHtmlLink":"ENH: Add deprecation warning for old attribute filter in SH proxy model"}},{"before":"18517e2e3611c616c7e6e6fed7c091e9480982a0","after":"009c3137b5d85f2e12337f84ed34cfb24723caa7","ref":"refs/heads/sh-attribute-filter-deprecation","pushedAt":"2023-10-30T13:44:23.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"DOC: Add deprecation warning for old attribute filter in SH proxy model\n\nRe https://discourse.slicer.org/t/problems-filtering-subject-hierarchy-tree/32435/5","shortMessageHtmlLink":"DOC: Add deprecation warning for old attribute filter in SH proxy model"}},{"before":null,"after":"18517e2e3611c616c7e6e6fed7c091e9480982a0","ref":"refs/heads/sh-attribute-filter-deprecation","pushedAt":"2023-10-30T12:37:05.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"DOC: Add deprecation warning for old attribute filter in SH proxy model\n\nRe https://discourse.slicer.org/t/problems-filtering-subject-hierarchy-tree/32435/5","shortMessageHtmlLink":"DOC: Add deprecation warning for old attribute filter in SH proxy model"}},{"before":"1fc82da7102480aa540bfdd67ea209eb174a37eb","after":"1aa002c4d751ccdbbb7d0f6db7cdd4beed629e6b","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2023-10-19T13:45:15.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Remove option NRRD_CHUNK_IO_AVAILABLE from volume sequence storage\n\nThis simplifies the code as a preparation step towards switching to ITK IO.\n\nThe NRRD_CHUNK_IO_AVAILABLE option belongs to a proprietary project that is now finished and not maintained. Since there is no way to test this feature we decided to remove it.","shortMessageHtmlLink":"ENH: Remove option NRRD_CHUNK_IO_AVAILABLE from volume sequence storage"}},{"before":null,"after":"1fc82da7102480aa540bfdd67ea209eb174a37eb","ref":"refs/heads/volume-sequence-io-5D","pushedAt":"2023-10-19T13:44:22.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Remove option NRRD_CHUNK_IO_AVAILABLE from volume sequence storage\n\nThis simplifies the code as a preparation step towards switching to ITK IO.","shortMessageHtmlLink":"ENH: Remove option NRRD_CHUNK_IO_AVAILABLE from volume sequence storage"}},{"before":"4bf2f13d79b07244fadaddb18079ec34edd1c28a","after":"4c694f9bf508a2930fed60a2022bd96fc49eb6d7","ref":"refs/heads/7288-fix-py_subjecthierarchygenericselftest","pushedAt":"2023-10-18T16:52:45.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"jcfr","name":"Jean-Christophe Fillion-Robin","path":"/jcfr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/219043?s=80&v=4"},"commit":{"message":"BUG: Fix SubjectHierarchyGenericSelfTest\n\nFollow-up of 5f7ae8daa (ENH: Improve empty folder visibility logic):\n\n- Update test to consider that empty folders are now visible by default.\n- Update testAttributeFilters to check for showEmptyHierarchyItems set\n to False and True.\n\nFixes #7288\n\nCo-authored-by: Jean-Christophe Fillion-Robin ","shortMessageHtmlLink":"BUG: Fix SubjectHierarchyGenericSelfTest"}},{"before":"0721272e1afac960fd946430ade28ef8d3af014a","after":"4bf2f13d79b07244fadaddb18079ec34edd1c28a","ref":"refs/heads/7288-fix-py_subjecthierarchygenericselftest","pushedAt":"2023-10-18T15:04:17.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"jcfr","name":"Jean-Christophe Fillion-Robin","path":"/jcfr","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/219043?s=80&v=4"},"commit":{"message":"BUG: Fix SubjectHierarchyGenericSelfTest\n\nFollow-up of 5f7ae8daa (ENH: Improve empty folder visibility logic):\n\n- The test assumed incorrect shown item count including the empty folder (which flag is enabled by default), expected item counts has been fixed\n- Update testAttributeFilters to check for showEmptyHierarchyItems flag, which has not been tested until now\n\nRe #7288\n\nCo-authored-by: Jean-Christophe Fillion-Robin ","shortMessageHtmlLink":"BUG: Fix SubjectHierarchyGenericSelfTest"}},{"before":null,"after":"0721272e1afac960fd946430ade28ef8d3af014a","ref":"refs/heads/7288-fix-py_subjecthierarchygenericselftest","pushedAt":"2023-10-18T14:42:17.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"BUG: Fix SubjectHierarchyGenericSelfTest\n\n- The test assumed incorrect shown item count including the empty folder (which flag is enabled by default), expected item counts has been fixed\n- Add test for the showEmptyHierarchyItems flag, which has not been tested until now\n\nRe #7288","shortMessageHtmlLink":"BUG: Fix SubjectHierarchyGenericSelfTest"}},{"before":"6f02883597c151aabd056a299ec387dae97c1940","after":"cda3514d3c504efa3151d678d0cbaeb6e8837e89","ref":"refs/heads/show-segment-id-in-sh-tooltip","pushedAt":"2023-09-13T13:44:13.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Show segment ID in tooltip for segments in subject hierarchy","shortMessageHtmlLink":"ENH: Show segment ID in tooltip for segments in subject hierarchy"}},{"before":null,"after":"6f02883597c151aabd056a299ec387dae97c1940","ref":"refs/heads/show-segment-id-in-sh-tooltip","pushedAt":"2023-09-13T11:31:27.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Show segment ID in tooltip for segments in subject hierarchy","shortMessageHtmlLink":"ENH: Show segment ID in tooltip for segments in subject hierarchy"}},{"before":"d5e3227f7bf5996d874da09edd2f9e7b6e76fcd2","after":"52b7ad928d89a6c74494673aa76a65cda41a0d9e","ref":"refs/heads/segment-pickable","pushedAt":"2023-06-04T15:21:31.461Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"BUG: Set segment Pickable display property to true if not specified\n\nPickable is a new segment display property, so when loading existing segmentations it will be missing from the display node. In this case the default true value needs to be specified, otherwise no segments will be pickable (i.e. no fiducials or other points can be placed on them).\n\nThis commit also fixes saving of the Pickable property. Now it is saved and loaded as a boolean property, as \"true\" or \"false\" instead of 0 or 1.","shortMessageHtmlLink":"BUG: Set segment Pickable display property to true if not specified"}},{"before":"f7d25a81b904e38c36b354203275bbb2c8d02f0a","after":"d5e3227f7bf5996d874da09edd2f9e7b6e76fcd2","ref":"refs/heads/segment-pickable","pushedAt":"2023-06-04T15:19:49.139Z","pushType":"push","commitsCount":1,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"BUG: Set segment Pickable display property to true if not specified\n\nPickable is a new segment display property, so when loading existing segmentations it will be missing from the display node. In this case the default true value needs to be specified, otherwise no segments will be pickable (i.e. no fiducials or other points can be placed on them).\n\nThis commit also fixes saving of the Pickable property. Now it is saved and loaded as a boolean property, as \"true\" or \"false\" instead of 0 or 1.","shortMessageHtmlLink":"BUG: Set segment Pickable display property to true if not specified"}},{"before":"12cf53754c616e17ab46de713a3f445f5480a319","after":"f7d25a81b904e38c36b354203275bbb2c8d02f0a","ref":"refs/heads/segment-pickable","pushedAt":"2023-06-04T14:56:46.274Z","pushType":"push","commitsCount":1,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"BUG: Set segment Pickable display property to true if not specified\n\nPickable is a new segment display property, so when loading existing segmentations it will be missing from the display node. In this case the default true value needs to be specified, otherwise no segments will be pickable (i.e. no fiducials or other points can be placed on them).","shortMessageHtmlLink":"BUG: Set segment Pickable display property to true if not specified"}},{"before":"c43a859a28cb3afcf823872a188fde6a76f4904b","after":"10c2753c5cdbc0f05cb22314e98da7954b247248","ref":"refs/heads/special-chars-in-dicom-sc-export","pushedAt":"2023-06-02T13:23:58.362Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Support special characters when saving scene to DICOM SC\n\nExporting scene packaged in MRB as secondary capture (SC) now supports special characters in DICOM metadata, for example patient name.","shortMessageHtmlLink":"ENH: Support special characters when saving scene to DICOM SC"}},{"before":"daf219af64e701cb7b890bc63ceb20f1973b360f","after":"c43a859a28cb3afcf823872a188fde6a76f4904b","ref":"refs/heads/special-chars-in-dicom-sc-export","pushedAt":"2023-06-02T11:17:05.123Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Support special characters when saving scene to DICOM SC\n\nExporting scene packaged in MRB as secondary capture (SC) now supports special characters in DICOM metadata, for example patient name.","shortMessageHtmlLink":"ENH: Support special characters when saving scene to DICOM SC"}},{"before":"06dcf5737fc8850e65e18260c16ddabd4ea2abd1","after":"12cf53754c616e17ab46de713a3f445f5480a319","ref":"refs/heads/segment-pickable","pushedAt":"2023-06-01T11:56:39.988Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"cpinter","name":"Csaba Pinter","path":"/cpinter","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/1325980?s=80&v=4"},"commit":{"message":"ENH: Add Pickable segment display property to allow disable point picking","shortMessageHtmlLink":"ENH: Add Pickable segment display property to allow disable point pic…"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEZ3DAJAA","startCursor":null,"endCursor":null}},"title":"Activity · cpinter/Slicer"}