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{% extends 'base.html' %}
{% block title %}Cancer miRNA Regulatory Network{% endblock %}
{% block javascript %} <script type="text/javascript" src="/static/jquery-1.6.1.min.js"></script>
<script type="text/javascript" src="/static/jquery.tablesorter.min.js"></script>
<script type='text/javascript'>
$(document).ready(function()
{
$("#clusterTable").tablesorter( {sortList: [[0,0], [1,0]]} );
}
);
</script>
{% endblock %}
{% block content_col1 %} <p>
<table class='center'>
<tr>
<td class='header'>
<div class='center1'>Overlapping miRNA Target Sites and GO Term Enrichment</div>
</td>
</tr>
<tr>
<td><font color='red'>{{ entries|length }}</font> Clusters</td>
</tr>
<tr>
<td><font color='red'>{{ miRNAs }}</font> miRNAs</td>
</tr>
<tr>
<td>Please click on a column heading to sort on the values in that column. <b><sup>DE</sup></b> indicates the miRNA was found to be differentially expressed in patient tumors of the same cancer type and is a link to the relevant enrtry in <a href='http://www.mir2disease.org' target='_blank'>miR2Disease</a>. Gene ontology enrichment categories: <b>BP</b> = biological process, <b>CC</b> = cellular component and <b>MF</b> = molecular function. Please click on a category to see the enriched GO terms from that category. Empty entries indicate no information is available.</td>
</tr>
<tr>
<td>
<table id='clusterTable' class='tablesorter' width='100%'>
<thead>
<tr>
<td colspan=2></td><td class='header3' colspan=3>Inferred miRNA Regulator</td><td></td>
</tr>
<tr>
<th class='header_left'>Cancer Dataset</th>
<th class='header_middle'>Cluster</th>
<th class='header_middle'>miRvesitgator</th>
<th class='header_middle'>PITA</th>
<th class='header_middle'>TargetScan</th>
<th class='header_right'>Gene Ontology Enrichment</th>
</tr>
</thead>
<tbody>
{% for entry in entries %}
<tr>
<td class='entry_left'><a href='/dataset/{{ entry.dataset }}'>{{ entry.dataset }}</a></td>
<td class='entry_middle'><a href='/cluster/{{ entry.dataset }}/{{ entry.number }}'>{{ entry.number }}</a></td>
<td class='entry_middle'>
{% if entry.miRvestigator %}
{% for mature_sequence_id, miRNA in entry.miRvestigator.items %}
<a href='/miRNA/{{ entry.dataset }}/{{ entry.number }}/{{ mature_sequence_id }}'>{{ miRNA.name }}</a> {% if miRNA.validation %} <sup><a href="http://watson.compbio.iupui.edu:8080/miR2Disease/searchMiRNA.jsp?filter='hsa-{{ miRNA.name }}'" target='_blank'>DE</a></sup>{% endif %}</br>
{% endfor%}
{% else %}
<span class='matchBackground'>zzz999</span>
{% endif %}
</td>
<td class='entry_middle'>
{% if entry.PITA %}
{% for mature_sequence_id, miRNA in entry.PITA.items %}
<a href='/miRNA/{{ entry.dataset }}/{{ entry.number }}/{{ mature_sequence_id }}'>{{ miRNA.name }}</a> {% if miRNA.validation %} <sup><a href="http://watson.compbio.iupui.edu:8080/miR2Disease/searchMiRNA.jsp?filter='hsa-{{ miRNA.name }}'" target='_blank'>DE</a></sup>{% endif %}</br>
{% endfor%}
{% else %}
<span class='matchBackground'>zzz999</span>
{% endif %}
</td>
<td class='entry_middle'>
{% if entry.TargetScan %}
{% for mature_sequence_id, miRNA in entry.TargetScan.items %}
<a href='/miRNA/{{ entry.dataset }}/{{ entry.number }}/{{ mature_sequence_id }}'>{{ miRNA.name }}</a> {% if miRNA.validation %} <sup><a href="http://watson.compbio.iupui.edu:8080/miR2Disease/searchMiRNA.jsp?filter='hsa-{{ miRNA.name }}'" target='_blank'>DE</a></sup>{% endif %}</br>
{% endfor%}
{% else %}
<span class='matchBackground'>zzz999</span>
{% endif %}
</td>
<td class='entry_right'><center>
<table cellpadding=0 cellspacing=0>
<tr>
{% if entry.BP or entry.CC or entry.MF %}
{% if entry.BP %}<td class='center3'><a href='/{{ entry.url_bp }}'>BP</a></td>{% endif %}
{% if entry.CC %}<td class='center3'><a href='/{{ entry.url_cc }}'>CC</a></td>{% endif %}
{% if entry.MF %}<td class='center3'><a href='/{{ entry.url_mf }}'>MF</a></td>{% endif %}
{% else %}
<span class='matchBackground'>zzz999</span>
{% endif %}
</tr>
</table>
</center></td>
</tr>
{% endfor %}
</tbody>
</table>
</td>
</tr>
</table>
</p>
{% endblock %}