From b694db83b498ca76ee7c4136b6b74aca686bcff8 Mon Sep 17 00:00:00 2001 From: Remi Gau Date: Sun, 1 Nov 2020 06:52:09 +0100 Subject: [PATCH] fix typo in copyright --- demos/openneuro/ds000001_getOption.m | 2 +- demos/openneuro/ds000001_run.m | 2 +- demos/openneuro/ds000114_getOption.m | 2 +- demos/openneuro/ds000114_run.m | 2 +- demos/openneuro/ds001168_getOption.m | 2 +- demos/openneuro/ds001168_run.m | 2 +- demos/vismotion/batch.m | 2 +- demos/vismotion/getOption.m | 2 +- miss_hit.cfg | 2 +- src/QA/anatomicalQA.m | 2 +- src/QA/functionalQA.m | 2 +- src/batches/setBatchComputeVDM.m | 2 +- src/batches/setBatchCoregistration.m | 2 +- src/batches/setBatchCoregistrationFmap.m | 2 +- src/batches/setBatchCoregistrationFuncToAnat.m | 2 +- src/batches/setBatchCreateVDMs.m | 2 +- src/batches/setBatchFactorialDesign.m | 2 +- src/batches/setBatchImageCalculation.m | 2 +- src/batches/setBatchMeanAnatAndMask.m | 2 +- src/batches/setBatchNormalizationSpatialPrepro.m | 2 +- src/batches/setBatchNormalize.m | 2 +- src/batches/setBatchRealign.m | 2 +- src/batches/setBatchReslice.m | 2 +- src/batches/setBatchSTC.m | 2 +- src/batches/setBatchSaveCoregistrationMatrix.m | 2 +- src/batches/setBatchSegmentation.m | 2 +- src/batches/setBatchSelectAnat.m | 2 +- src/batches/setBatchSkullStripping.m | 2 +- src/batches/setBatchSmoothConImages.m | 2 +- src/batches/setBatchSmoothing.m | 2 +- src/batches/setBatchSubjectLevelContrasts.m | 2 +- src/batches/setBatchSubjectLevelGLMSpec.m | 2 +- src/defaults/checkOptions.m | 2 +- src/defaults/spm_my_defaults.m | 2 +- src/fieldmaps/getBlipDirection.m | 2 +- src/fieldmaps/getMetadataFromIntendedForFunc.m | 2 +- src/fieldmaps/getTotalReadoutTime.m | 2 +- src/fieldmaps/getVdmFile.m | 2 +- src/getAnatFilename.m | 2 +- src/getBoldFilename.m | 2 +- src/getData.m | 2 +- src/getFuncVoxelDims.m | 2 +- src/getInfo.m | 2 +- src/getMeanFuncFilename.m | 2 +- src/getPrefix.m | 2 +- src/getRealignParamFile.m | 2 +- src/getSliceOrder.m | 2 +- src/getSpecificSubjects.m | 2 +- src/group_level/getGrpLevelContrastToCompute.m | 2 +- src/group_level/getRFXdir.m | 2 +- src/mancoreg/mancoreg.m | 2 +- src/mancoreg/mancoregCallbacks.m | 2 +- src/reports/copyGraphWindownOutput.m | 2 +- src/reports/reportBIDS.m | 2 +- src/setDerivativesDir.m | 2 +- src/subject_level/concatBetaImgTmaps.m | 2 +- src/subject_level/convertOnsetTsvToMat.m | 2 +- src/subject_level/createAndReturnOnsetFile.m | 2 +- src/subject_level/deleteResidualImages.m | 2 +- src/subject_level/getBoldFilenameForFFX.m | 2 +- src/subject_level/getFFXdir.m | 2 +- src/subject_level/specifyContrasts.m | 2 +- src/templates/templateFunction.m | 2 +- src/templates/templateFunctionExample.m | 2 +- src/templates/templateFunctionNumpy.m | 2 +- src/templates/templateGetOption.m | 2 +- src/unzipImgAndReturnsFullpathName.m | 2 +- src/utils/checkDependencies.m | 2 +- src/utils/createDataDictionary.m | 2 +- src/utils/getEnvInfo.m | 2 +- src/utils/getVersion.m | 2 +- src/utils/isOctave.m | 2 +- src/utils/loadAndCheckOptions.m | 2 +- src/utils/printCredits.m | 2 +- src/utils/printProcessingRun.m | 2 +- src/utils/printProcessingSubject.m | 2 +- src/utils/saveMatlabBatch.m | 2 +- src/utils/saveOptions.m | 2 +- src/utils/setDefaultFields.m | 2 +- src/utils/setGraphicWindow.m | 2 +- src/utils/validationInputFile.m | 2 +- src/workflows/bidsCopyRawFolder.m | 2 +- src/workflows/bidsCreateVDM.m | 2 +- src/workflows/bidsFFX.m | 2 +- src/workflows/bidsRFX.m | 2 +- src/workflows/bidsRealignReslice.m | 2 +- src/workflows/bidsRealignUnwarp.m | 2 +- src/workflows/bidsResliceTpmToFunc.m | 2 +- src/workflows/bidsResults.m | 2 +- src/workflows/bidsSTC.m | 2 +- src/workflows/bidsSegmentSkullStrip.m | 2 +- src/workflows/bidsSmoothing.m | 2 +- src/workflows/bidsSpatialPrepro.m | 2 +- 93 files changed, 93 insertions(+), 93 deletions(-) diff --git a/demos/openneuro/ds000001_getOption.m b/demos/openneuro/ds000001_getOption.m index 6de06884..0ff2bced 100644 --- a/demos/openneuro/ds000001_getOption.m +++ b/demos/openneuro/ds000001_getOption.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function opt = ds000001_getOption() % returns a structure that contains the options chosen by the user to run diff --git a/demos/openneuro/ds000001_run.m b/demos/openneuro/ds000001_run.m index 02b53077..c3da5d6d 100644 --- a/demos/openneuro/ds000001_run.m +++ b/demos/openneuro/ds000001_run.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers % runDs00014 diff --git a/demos/openneuro/ds000114_getOption.m b/demos/openneuro/ds000114_getOption.m index 4630dca9..b3527bfc 100644 --- a/demos/openneuro/ds000114_getOption.m +++ b/demos/openneuro/ds000114_getOption.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function opt = ds000114_getOption() % returns a structure that contains the options chosen by the user to run diff --git a/demos/openneuro/ds000114_run.m b/demos/openneuro/ds000114_run.m index bd682bbe..1ccce4db 100644 --- a/demos/openneuro/ds000114_run.m +++ b/demos/openneuro/ds000114_run.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers % runDs00014 diff --git a/demos/openneuro/ds001168_getOption.m b/demos/openneuro/ds001168_getOption.m index 1183b3ca..028da8b9 100644 --- a/demos/openneuro/ds001168_getOption.m +++ b/demos/openneuro/ds001168_getOption.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function opt = ds001168_getOption() % returns a structure that contains the options chosen by the user to run diff --git a/demos/openneuro/ds001168_run.m b/demos/openneuro/ds001168_run.m index f37e6503..e8ab780c 100644 --- a/demos/openneuro/ds001168_run.m +++ b/demos/openneuro/ds001168_run.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers % runDs001168 diff --git a/demos/vismotion/batch.m b/demos/vismotion/batch.m index b55f7004..75e9ff72 100644 --- a/demos/vismotion/batch.m +++ b/demos/vismotion/batch.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers clear; clc; diff --git a/demos/vismotion/getOption.m b/demos/vismotion/getOption.m index 978fd724..dca50692 100644 --- a/demos/vismotion/getOption.m +++ b/demos/vismotion/getOption.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function opt = getOption() % opt = getOption() diff --git a/miss_hit.cfg b/miss_hit.cfg index eaf4ca32..2c6a2b5c 100644 --- a/miss_hit.cfg +++ b/miss_hit.cfg @@ -8,7 +8,7 @@ copyright_entity: "Agah Karakuzu" copyright_entity: "Olivier Collignon" copyright_entity: "Mohamed Rezk" copyright_entity: "Remi Gau" -copyright_entity: "CPP BIDS SPM-pipeline developpers" +copyright_entity: "CPP BIDS SPM-pipeline developers" tab_width: 2 diff --git a/src/QA/anatomicalQA.m b/src/QA/anatomicalQA.m index c8336812..4016af5a 100644 --- a/src/QA/anatomicalQA.m +++ b/src/QA/anatomicalQA.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function anatomicalQA(opt) % anatomicalQA(opt) diff --git a/src/QA/functionalQA.m b/src/QA/functionalQA.m index ed016a9b..823e7ac5 100644 --- a/src/QA/functionalQA.m +++ b/src/QA/functionalQA.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function functionalQA(opt) % functionalQA(opt) diff --git a/src/batches/setBatchComputeVDM.m b/src/batches/setBatchComputeVDM.m index 2c840c1b..b464a2e0 100644 --- a/src/batches/setBatchComputeVDM.m +++ b/src/batches/setBatchComputeVDM.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchComputeVDM(matlabbatch, fmapType, refImage) % matlabbatch = setBatchComputeVDM(type) diff --git a/src/batches/setBatchCoregistration.m b/src/batches/setBatchCoregistration.m index 5cb17502..9562319e 100644 --- a/src/batches/setBatchCoregistration.m +++ b/src/batches/setBatchCoregistration.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchCoregistration(matlabbatch, ref, src, other) % matlabbatch = setBatchCoregistrationGeneral(matlabbatch, ref, src, other) diff --git a/src/batches/setBatchCoregistrationFmap.m b/src/batches/setBatchCoregistrationFmap.m index 4e73a142..98a913cb 100644 --- a/src/batches/setBatchCoregistrationFmap.m +++ b/src/batches/setBatchCoregistrationFmap.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchCoregistrationFmap(BIDS, opt, subID) diff --git a/src/batches/setBatchCoregistrationFuncToAnat.m b/src/batches/setBatchCoregistrationFuncToAnat.m index 40e11635..02984f87 100644 --- a/src/batches/setBatchCoregistrationFuncToAnat.m +++ b/src/batches/setBatchCoregistrationFuncToAnat.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchCoregistrationFuncToAnat(matlabbatch, BIDS, subID, opt) diff --git a/src/batches/setBatchCreateVDMs.m b/src/batches/setBatchCreateVDMs.m index 79d782df..2d3e7fd8 100644 --- a/src/batches/setBatchCreateVDMs.m +++ b/src/batches/setBatchCreateVDMs.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchCreateVDMs(BIDS, opt, subID) % diff --git a/src/batches/setBatchFactorialDesign.m b/src/batches/setBatchFactorialDesign.m index 0c993ed6..4c26f327 100644 --- a/src/batches/setBatchFactorialDesign.m +++ b/src/batches/setBatchFactorialDesign.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchFactorialDesign(grpLvlCon, group, conFWHM, rfxDir) diff --git a/src/batches/setBatchImageCalculation.m b/src/batches/setBatchImageCalculation.m index 076af5e4..90923d33 100644 --- a/src/batches/setBatchImageCalculation.m +++ b/src/batches/setBatchImageCalculation.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchImageCalculation(matlabbatch, input, output, outDir, expression) diff --git a/src/batches/setBatchMeanAnatAndMask.m b/src/batches/setBatchMeanAnatAndMask.m index cdd4aa7e..bc4a02ce 100644 --- a/src/batches/setBatchMeanAnatAndMask.m +++ b/src/batches/setBatchMeanAnatAndMask.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchMeanAnatAndMask(opt, funcFWHM, rfxDir) diff --git a/src/batches/setBatchNormalizationSpatialPrepro.m b/src/batches/setBatchNormalizationSpatialPrepro.m index e1b6ba56..6c79ab42 100644 --- a/src/batches/setBatchNormalizationSpatialPrepro.m +++ b/src/batches/setBatchNormalizationSpatialPrepro.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchNormalizationSpatialPrepro(matlabbatch, voxDim, opt) diff --git a/src/batches/setBatchNormalize.m b/src/batches/setBatchNormalize.m index 47ea9385..831c0682 100644 --- a/src/batches/setBatchNormalize.m +++ b/src/batches/setBatchNormalize.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchNormalize(matlabbatch, deformField, voxDim, imgToResample) diff --git a/src/batches/setBatchRealign.m b/src/batches/setBatchRealign.m index 7c9c5610..172535a2 100644 --- a/src/batches/setBatchRealign.m +++ b/src/batches/setBatchRealign.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [matlabbatch, voxDim] = setBatchRealign(varargin) % diff --git a/src/batches/setBatchReslice.m b/src/batches/setBatchReslice.m index 3de4a142..2c103b3f 100644 --- a/src/batches/setBatchReslice.m +++ b/src/batches/setBatchReslice.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchReslice(referenceImg, sourceImages) % matlabbatch = bidsSmoothing(referenceImg, sourceImages) diff --git a/src/batches/setBatchSTC.m b/src/batches/setBatchSTC.m index d79a7f50..a0335a53 100644 --- a/src/batches/setBatchSTC.m +++ b/src/batches/setBatchSTC.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSTC(BIDS, opt, subID) % matlabbatch = setBatchSTC(BIDS, opt, subID) diff --git a/src/batches/setBatchSaveCoregistrationMatrix.m b/src/batches/setBatchSaveCoregistrationMatrix.m index 99e70647..ac5d5008 100644 --- a/src/batches/setBatchSaveCoregistrationMatrix.m +++ b/src/batches/setBatchSaveCoregistrationMatrix.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSaveCoregistrationMatrix(matlabbatch, BIDS, subID, opt) diff --git a/src/batches/setBatchSegmentation.m b/src/batches/setBatchSegmentation.m index 9b8b03b6..78721948 100644 --- a/src/batches/setBatchSegmentation.m +++ b/src/batches/setBatchSegmentation.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSegmentation(matlabbatch, opt) diff --git a/src/batches/setBatchSelectAnat.m b/src/batches/setBatchSelectAnat.m index 3434391a..d4476f08 100644 --- a/src/batches/setBatchSelectAnat.m +++ b/src/batches/setBatchSelectAnat.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSelectAnat(matlabbatch, BIDS, opt, subID) % matlabbatch = setBatchSelectAnat(matlabbatch, BIDS, opt, subID) diff --git a/src/batches/setBatchSkullStripping.m b/src/batches/setBatchSkullStripping.m index 5f1d4fbf..b69c1a00 100644 --- a/src/batches/setBatchSkullStripping.m +++ b/src/batches/setBatchSkullStripping.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSkullStripping(matlabbatch, BIDS, subID, opt) % diff --git a/src/batches/setBatchSmoothConImages.m b/src/batches/setBatchSmoothConImages.m index 6d963386..a6d65773 100644 --- a/src/batches/setBatchSmoothConImages.m +++ b/src/batches/setBatchSmoothConImages.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSmoothConImages(group, funcFWHM, conFWHM, opt) diff --git a/src/batches/setBatchSmoothing.m b/src/batches/setBatchSmoothing.m index 65485741..1ca9015c 100644 --- a/src/batches/setBatchSmoothing.m +++ b/src/batches/setBatchSmoothing.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSmoothing(BIDS, opt, subID, funcFWHM) diff --git a/src/batches/setBatchSubjectLevelContrasts.m b/src/batches/setBatchSubjectLevelContrasts.m index bef88657..34bb15fb 100644 --- a/src/batches/setBatchSubjectLevelContrasts.m +++ b/src/batches/setBatchSubjectLevelContrasts.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSubjectLevelContrasts(opt, subID, funcFWHM) diff --git a/src/batches/setBatchSubjectLevelGLMSpec.m b/src/batches/setBatchSubjectLevelGLMSpec.m index 1ba5e76c..c07948da 100644 --- a/src/batches/setBatchSubjectLevelGLMSpec.m +++ b/src/batches/setBatchSubjectLevelGLMSpec.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function matlabbatch = setBatchSubjectLevelGLMSpec(varargin) diff --git a/src/defaults/checkOptions.m b/src/defaults/checkOptions.m index 952d34cd..b87cd0bf 100644 --- a/src/defaults/checkOptions.m +++ b/src/defaults/checkOptions.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function opt = checkOptions(opt) % opt = checkOptions(opt) diff --git a/src/defaults/spm_my_defaults.m b/src/defaults/spm_my_defaults.m index d9b1b94a..f2cf37d7 100644 --- a/src/defaults/spm_my_defaults.m +++ b/src/defaults/spm_my_defaults.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function spm_my_defaults % This is where we set the defautls we want to use. diff --git a/src/fieldmaps/getBlipDirection.m b/src/fieldmaps/getBlipDirection.m index 0212f7c6..33bbb2db 100644 --- a/src/fieldmaps/getBlipDirection.m +++ b/src/fieldmaps/getBlipDirection.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function blipDir = getBlipDirection(metadata) % diff --git a/src/fieldmaps/getMetadataFromIntendedForFunc.m b/src/fieldmaps/getMetadataFromIntendedForFunc.m index e0b28830..5f5b1218 100644 --- a/src/fieldmaps/getMetadataFromIntendedForFunc.m +++ b/src/fieldmaps/getMetadataFromIntendedForFunc.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [totalReadoutTime, blipDir] = getMetadataFromIntendedForFunc(BIDS, fmapMetadata) % get metadata of the associated bold file diff --git a/src/fieldmaps/getTotalReadoutTime.m b/src/fieldmaps/getTotalReadoutTime.m index b4c7770b..f9f2122a 100644 --- a/src/fieldmaps/getTotalReadoutTime.m +++ b/src/fieldmaps/getTotalReadoutTime.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function totalReadoutTime = getTotalReadoutTime(metadata) % diff --git a/src/fieldmaps/getVdmFile.m b/src/fieldmaps/getVdmFile.m index 8c57dfb0..b83dfade 100644 --- a/src/fieldmaps/getVdmFile.m +++ b/src/fieldmaps/getVdmFile.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function vdmFile = getVdmFile(BIDS, opt, boldFilename) % diff --git a/src/getAnatFilename.m b/src/getAnatFilename.m index 66a6cc9b..e1361e47 100644 --- a/src/getAnatFilename.m +++ b/src/getAnatFilename.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [anatImage, anatDataDir] = getAnatFilename(BIDS, subID, opt) % [anatImage, anatDataDir] = getAnatFilename(BIDS, subID, opt) diff --git a/src/getBoldFilename.m b/src/getBoldFilename.m index 9c010ddc..bd453c1e 100644 --- a/src/getBoldFilename.m +++ b/src/getBoldFilename.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [boldFileName, subFuncDataDir] = getBoldFilename(varargin) % [fileName, subFuncDataDir] = getBoldFilename(BIDS, opt, subID, sessionID, runID) diff --git a/src/getData.m b/src/getData.m index f7656b37..956dea12 100644 --- a/src/getData.m +++ b/src/getData.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [group, opt, BIDS] = getData(opt, BIDSdir, type) % [group, opt, BIDS] = getData(opt, BIDSdir, type) diff --git a/src/getFuncVoxelDims.m b/src/getFuncVoxelDims.m index d5fe3851..8ac87338 100644 --- a/src/getFuncVoxelDims.m +++ b/src/getFuncVoxelDims.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [voxDim, opt] = getFuncVoxelDims(opt, subFuncDataDir, prefix, fileName) % [voxDim, opt] = getFuncVoxelDims(opt, subFuncDataDir, prefix, fileName) diff --git a/src/getInfo.m b/src/getInfo.m index dd4a8626..8b137b9a 100644 --- a/src/getInfo.m +++ b/src/getInfo.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function varargout = getInfo(BIDS, subID, opt, info, varargin) % wrapper function to fetch specific info in a BIDS structure returned by diff --git a/src/getMeanFuncFilename.m b/src/getMeanFuncFilename.m index 72a7459e..63933da4 100644 --- a/src/getMeanFuncFilename.m +++ b/src/getMeanFuncFilename.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [meanImage, meanFuncDir] = getMeanFuncFilename(BIDS, subID, opt) % [anatImage, anatDataDir] = getAnatFilename(BIDS, subID, opt) diff --git a/src/getPrefix.m b/src/getPrefix.m index 2314b8d8..8e6dbe15 100644 --- a/src/getPrefix.m +++ b/src/getPrefix.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [prefix, motionRegressorPrefix] = getPrefix(step, opt, funcFWHM) % [prefix, motionRegressorPrefix] = getPrefix(step, opt, funcFWHM) diff --git a/src/getRealignParamFile.m b/src/getRealignParamFile.m index c4347b70..85182a30 100644 --- a/src/getRealignParamFile.m +++ b/src/getRealignParamFile.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function realignParamFile = getRealignParamFile(fullpathBoldFileName, prefix) diff --git a/src/getSliceOrder.m b/src/getSliceOrder.m index 37449801..7671a206 100644 --- a/src/getSliceOrder.m +++ b/src/getSliceOrder.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function sliceOrder = getSliceOrder(opt, verbose) % get the slice order information from the BIDS data set or from getOption diff --git a/src/getSpecificSubjects.m b/src/getSpecificSubjects.m index af259063..190a48bd 100644 --- a/src/getSpecificSubjects.m +++ b/src/getSpecificSubjects.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function group = getSpecificSubjects(opt, group, iGroup, subjects) diff --git a/src/group_level/getGrpLevelContrastToCompute.m b/src/group_level/getGrpLevelContrastToCompute.m index 0aa43951..1833e6fa 100644 --- a/src/group_level/getGrpLevelContrastToCompute.m +++ b/src/group_level/getGrpLevelContrastToCompute.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function [grpLvlCon, iStep] = getGrpLevelContrastToCompute(opt) diff --git a/src/group_level/getRFXdir.m b/src/group_level/getRFXdir.m index ec797f94..052fdbe1 100644 --- a/src/group_level/getRFXdir.m +++ b/src/group_level/getRFXdir.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function rfxDir = getRFXdir(opt, funcFWHM, conFWHM, contrastName) % rfxDir = getRFXdir(opt, funcFWHM, conFWHM, iStep, iCon) diff --git a/src/mancoreg/mancoreg.m b/src/mancoreg/mancoreg.m index d2cf31e7..717decd0 100644 --- a/src/mancoreg/mancoreg.m +++ b/src/mancoreg/mancoreg.m @@ -1,7 +1,7 @@ % (C) Copyright 2004-2009 JH % (C) Copyright 2009_2012 DSS % (C) Copyright 2012_2019 Remi Gau -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function mancoreg(targetimage, sourceimage) % mancoreg(targetimage, sourceimage) diff --git a/src/mancoreg/mancoregCallbacks.m b/src/mancoreg/mancoregCallbacks.m index f1bb63f0..9257e85d 100644 --- a/src/mancoreg/mancoregCallbacks.m +++ b/src/mancoreg/mancoregCallbacks.m @@ -1,7 +1,7 @@ % (C) Copyright 2004-2009 JH % (C) Copyright 2009_2012 DSS % (C) Copyright 2012_2019 Remi Gau -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function mancoregCallbacks(operation, varargin) % mancoreg_callbacks(op, varargin) diff --git a/src/reports/copyGraphWindownOutput.m b/src/reports/copyGraphWindownOutput.m index af716fc9..88e92598 100644 --- a/src/reports/copyGraphWindownOutput.m +++ b/src/reports/copyGraphWindownOutput.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function imgNb = copyGraphWindownOutput(opt, subID, action, imgNb) % diff --git a/src/reports/reportBIDS.m b/src/reports/reportBIDS.m index 49222d4c..4fe2adce 100644 --- a/src/reports/reportBIDS.m +++ b/src/reports/reportBIDS.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function reportBIDS(opt) diff --git a/src/setDerivativesDir.m b/src/setDerivativesDir.m index 3012c175..15d51c37 100644 --- a/src/setDerivativesDir.m +++ b/src/setDerivativesDir.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function opt = setDerivativesDir(opt) % derivativeDir sets the derivatives folder diff --git a/src/subject_level/concatBetaImgTmaps.m b/src/subject_level/concatBetaImgTmaps.m index eb776aa8..982b82ba 100644 --- a/src/subject_level/concatBetaImgTmaps.m +++ b/src/subject_level/concatBetaImgTmaps.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function concatBetaImgTmaps(funcFWHM, opt, deleteIndBeta, deleteIndTmaps) % Make 4D images of beta and t-maps for the MVPA. :: diff --git a/src/subject_level/convertOnsetTsvToMat.m b/src/subject_level/convertOnsetTsvToMat.m index 3917b70a..1a812360 100644 --- a/src/subject_level/convertOnsetTsvToMat.m +++ b/src/subject_level/convertOnsetTsvToMat.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function fullpathOnsetFileName = convertOnsetTsvToMat(opt, tsvFile) %% Converts a tsv file to an onset file suitable for SPM ffx analysis diff --git a/src/subject_level/createAndReturnOnsetFile.m b/src/subject_level/createAndReturnOnsetFile.m index a00bcdf2..9e3f1599 100644 --- a/src/subject_level/createAndReturnOnsetFile.m +++ b/src/subject_level/createAndReturnOnsetFile.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function onsetFileName = createAndReturnOnsetFile(opt, subID, tsvFile, funcFWHM) % onsetFileName = createAndReturnOnsetFile(opt, boldFileName, prefix, isMVPA) diff --git a/src/subject_level/deleteResidualImages.m b/src/subject_level/deleteResidualImages.m index 0ee6f805..aa51b58a 100644 --- a/src/subject_level/deleteResidualImages.m +++ b/src/subject_level/deleteResidualImages.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function deleteResidualImages(ffxDir) delete(fullfile(ffxDir, 'Res_*.nii')); diff --git a/src/subject_level/getBoldFilenameForFFX.m b/src/subject_level/getBoldFilenameForFFX.m index d0c5b42a..eafd7d72 100644 --- a/src/subject_level/getBoldFilenameForFFX.m +++ b/src/subject_level/getBoldFilenameForFFX.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [boldFileName, prefix] = getBoldFilenameForFFX(varargin) % [boldFileName, prefix] = getBoldFilenameForFFX(BIDS, opt, subID, funcFWHM, iSes, iRun) diff --git a/src/subject_level/getFFXdir.m b/src/subject_level/getFFXdir.m index b5304964..01d96403 100644 --- a/src/subject_level/getFFXdir.m +++ b/src/subject_level/getFFXdir.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function ffxDir = getFFXdir(subID, funcFWFM, opt) % ffxDir = getFFXdir(subID, funcFWFM, opt) diff --git a/src/subject_level/specifyContrasts.m b/src/subject_level/specifyContrasts.m index 5014b5d0..b886f517 100644 --- a/src/subject_level/specifyContrasts.m +++ b/src/subject_level/specifyContrasts.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function contrasts = specifyContrasts(ffxDir, taskName, opt) % Specifies the first level contrasts diff --git a/src/templates/templateFunction.m b/src/templates/templateFunction.m index 4b6135cc..6897f2f2 100644 --- a/src/templates/templateFunction.m +++ b/src/templates/templateFunction.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [argout1, argout2] = templateFunction(argin1, argin2, argin3) % diff --git a/src/templates/templateFunctionExample.m b/src/templates/templateFunctionExample.m index e4a39d6d..941690b5 100644 --- a/src/templates/templateFunctionExample.m +++ b/src/templates/templateFunctionExample.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function templateFunctionExample() % This function illustrates a documentation test defined for MOdox. diff --git a/src/templates/templateFunctionNumpy.m b/src/templates/templateFunctionNumpy.m index ff449f9d..fed5063d 100644 --- a/src/templates/templateFunctionNumpy.m +++ b/src/templates/templateFunctionNumpy.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [argout] = templateFunctionNumpy(argin1, argin2, argin3) % diff --git a/src/templates/templateGetOption.m b/src/templates/templateGetOption.m index b1eb5872..4946a976 100644 --- a/src/templates/templateGetOption.m +++ b/src/templates/templateGetOption.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function opt = templateGetOption() % returns a structure that contains the options chosen by the user to return diff --git a/src/unzipImgAndReturnsFullpathName.m b/src/unzipImgAndReturnsFullpathName.m index d13bed94..865687e8 100644 --- a/src/unzipImgAndReturnsFullpathName.m +++ b/src/unzipImgAndReturnsFullpathName.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function unzippedFullpathImgName = unzipImgAndReturnsFullpathName(fullpathImgName) % unzippedFullpathImgName = unzipImgAndReturnsFullpathName(fullpathImgName) diff --git a/src/utils/checkDependencies.m b/src/utils/checkDependencies.m index 7eb03dc3..2cb74613 100644 --- a/src/utils/checkDependencies.m +++ b/src/utils/checkDependencies.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function checkDependencies() % Checks that that the right dependencies are installed. ALso loads the spm defaults. diff --git a/src/utils/createDataDictionary.m b/src/utils/createDataDictionary.m index 454f6edb..3d8c1a55 100644 --- a/src/utils/createDataDictionary.m +++ b/src/utils/createDataDictionary.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function createDataDictionary(subFuncDataDir, fileName, nbColums) diff --git a/src/utils/getEnvInfo.m b/src/utils/getEnvInfo.m index 183e0af1..a7b16bd4 100644 --- a/src/utils/getEnvInfo.m +++ b/src/utils/getEnvInfo.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function [OS, GeneratedBy] = getEnvInfo() diff --git a/src/utils/getVersion.m b/src/utils/getVersion.m index f344ffb6..66536823 100644 --- a/src/utils/getVersion.m +++ b/src/utils/getVersion.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function versionNumber = getVersion() try diff --git a/src/utils/isOctave.m b/src/utils/isOctave.m index 8913cace..7f3cea40 100644 --- a/src/utils/isOctave.m +++ b/src/utils/isOctave.m @@ -1,5 +1,5 @@ % (C) Copyright 2020 Agah Karakuzu -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function retval = isOctave % Return: true if the environment is Octave. diff --git a/src/utils/loadAndCheckOptions.m b/src/utils/loadAndCheckOptions.m index 619b497a..df30316d 100644 --- a/src/utils/loadAndCheckOptions.m +++ b/src/utils/loadAndCheckOptions.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function opt = loadAndCheckOptions(opt) % opt = loadAndCheckOptions(opt) diff --git a/src/utils/printCredits.m b/src/utils/printCredits.m index 35c9624c..01ad0812 100644 --- a/src/utils/printCredits.m +++ b/src/utils/printCredits.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function printCredits() diff --git a/src/utils/printProcessingRun.m b/src/utils/printProcessingRun.m index d0b3efba..29769001 100644 --- a/src/utils/printProcessingRun.m +++ b/src/utils/printProcessingRun.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function printProcessingRun(groupName, iSub, subID, iSes, iRun) diff --git a/src/utils/printProcessingSubject.m b/src/utils/printProcessingSubject.m index 61e4a00a..cb5a27a5 100644 --- a/src/utils/printProcessingSubject.m +++ b/src/utils/printProcessingSubject.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function printProcessingSubject(groupName, iSub, subID) diff --git a/src/utils/saveMatlabBatch.m b/src/utils/saveMatlabBatch.m index c46138c7..79d1eb68 100644 --- a/src/utils/saveMatlabBatch.m +++ b/src/utils/saveMatlabBatch.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function saveMatlabBatch(matlabbatch, batchType, opt, subID) % saveMatlabBatch(batch, batchType, opt, subID) diff --git a/src/utils/saveOptions.m b/src/utils/saveOptions.m index 4d912caa..78585d90 100644 --- a/src/utils/saveOptions.m +++ b/src/utils/saveOptions.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function saveOptions(opt) diff --git a/src/utils/setDefaultFields.m b/src/utils/setDefaultFields.m index 98689d7d..d79505ce 100644 --- a/src/utils/setDefaultFields.m +++ b/src/utils/setDefaultFields.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function structure = setDefaultFields(structure, fieldsToSet) % structure = setDefaultFields(structure, fieldsToSet) diff --git a/src/utils/setGraphicWindow.m b/src/utils/setGraphicWindow.m index 1aedfc36..180c3274 100644 --- a/src/utils/setGraphicWindow.m +++ b/src/utils/setGraphicWindow.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function [interactiveWindow, graphWindow, cmdLine] = setGraphicWindow() diff --git a/src/utils/validationInputFile.m b/src/utils/validationInputFile.m index cc57ecdf..2a362cda 100644 --- a/src/utils/validationInputFile.m +++ b/src/utils/validationInputFile.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function files = validationInputFile(dir, fileName, prefix) % file = validationInputFile(dir, prefix, fileName) diff --git a/src/workflows/bidsCopyRawFolder.m b/src/workflows/bidsCopyRawFolder.m index 6f059559..06d5ca42 100644 --- a/src/workflows/bidsCopyRawFolder.m +++ b/src/workflows/bidsCopyRawFolder.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function bidsCopyRawFolder(opt, deleteZippedNii, modalitiesToCopy) % diff --git a/src/workflows/bidsCreateVDM.m b/src/workflows/bidsCreateVDM.m index ef196688..d6f98e9a 100644 --- a/src/workflows/bidsCreateVDM.m +++ b/src/workflows/bidsCreateVDM.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function bidsCreateVDM(opt) % bidsCreateVDM(opt) diff --git a/src/workflows/bidsFFX.m b/src/workflows/bidsFFX.m index 43d5d5e6..c06a36cc 100644 --- a/src/workflows/bidsFFX.m +++ b/src/workflows/bidsFFX.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function bidsFFX(action, opt, funcFWHM) % This scripts builds up the design matrix for each subject. diff --git a/src/workflows/bidsRFX.m b/src/workflows/bidsRFX.m index 766df24e..a32a36b3 100644 --- a/src/workflows/bidsRFX.m +++ b/src/workflows/bidsRFX.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function bidsRFX(action, funcFWHM, conFWHM, opt) % diff --git a/src/workflows/bidsRealignReslice.m b/src/workflows/bidsRealignReslice.m index 06dc8444..3b3c9b26 100644 --- a/src/workflows/bidsRealignReslice.m +++ b/src/workflows/bidsRealignReslice.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function bidsRealignReslice(opt) % bidsRealignReslice(opt) diff --git a/src/workflows/bidsRealignUnwarp.m b/src/workflows/bidsRealignUnwarp.m index b3857c06..15da1897 100644 --- a/src/workflows/bidsRealignUnwarp.m +++ b/src/workflows/bidsRealignUnwarp.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function bidsRealignUnwarp(opt) % bidsRealignReslice(opt) diff --git a/src/workflows/bidsResliceTpmToFunc.m b/src/workflows/bidsResliceTpmToFunc.m index d5a5671f..76dfe277 100644 --- a/src/workflows/bidsResliceTpmToFunc.m +++ b/src/workflows/bidsResliceTpmToFunc.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function bidsResliceTpmToFunc(opt) % bidsResliceTpmToFunc(opt) diff --git a/src/workflows/bidsResults.m b/src/workflows/bidsResults.m index c52f1e52..1673fd4b 100644 --- a/src/workflows/bidsResults.m +++ b/src/workflows/bidsResults.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function bidsResults(opt, funcFWHM, conFWHM) % This scripts computes the results for a series of contrast that can be diff --git a/src/workflows/bidsSTC.m b/src/workflows/bidsSTC.m index 35f206aa..49e2334c 100644 --- a/src/workflows/bidsSTC.m +++ b/src/workflows/bidsSTC.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function bidsSTC(opt) % Performs SLICE TIMING CORRECTION of the functional data. The diff --git a/src/workflows/bidsSegmentSkullStrip.m b/src/workflows/bidsSegmentSkullStrip.m index 8ec44571..d232174f 100644 --- a/src/workflows/bidsSegmentSkullStrip.m +++ b/src/workflows/bidsSegmentSkullStrip.m @@ -1,4 +1,4 @@ -% (C) Copyright 2020 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2020 CPP BIDS SPM-pipeline developers function bidsSegmentSkullStrip(opt) % diff --git a/src/workflows/bidsSmoothing.m b/src/workflows/bidsSmoothing.m index f0de29ee..c98c0c24 100644 --- a/src/workflows/bidsSmoothing.m +++ b/src/workflows/bidsSmoothing.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function bidsSmoothing(funcFWHM, opt) % This scripts performs smoothing to the functional data using a full width diff --git a/src/workflows/bidsSpatialPrepro.m b/src/workflows/bidsSpatialPrepro.m index 40026472..0616e0f9 100644 --- a/src/workflows/bidsSpatialPrepro.m +++ b/src/workflows/bidsSpatialPrepro.m @@ -1,4 +1,4 @@ -% (C) Copyright 2019 CPP BIDS SPM-pipeline developpers +% (C) Copyright 2019 CPP BIDS SPM-pipeline developers function bidsSpatialPrepro(opt) % bidsSpatialPrepro(opt)