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README.md

Bodylight-notebooks

Jupyter interactive notebooks demonstrating Bodylight and related technologies in order to do data science with models of medical physiology.

Usage

Some of the notebooks can be interactively launched via MyBinder: Binder

Otherwise use Bodylight-VirtualMachine - where preconfigured Jupyter notebook and depended environment is installed

git clone https://github.com/creative-connections/Bodylight-notebooks
git clone https://github.com/creative-connections/Bodylight-VirtualMachine
cd Bodylight-VirtualMachine 
vagrant up

Then the VM is configured to have shared directory /vagrant_data should be mapped to parent directory of Bodylight-VirtualMachine. http://localhost:8080/jupyter should show this vagrant_datadirectory

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Jupyter interactive notebooks demonstrating Bodylight and related technologies in order to do data science with models of medical physiology.

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