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Commits on Jul 22, 2016

  1. Merge pull request #15 from nsoranzo/master 

    Fix Makefile, test data and --version
    committed on GitHub Jul 22, 2016
    7e97dd4
  2. @nsoranzo

    minced --version should exit 0 

    There is no error.
    nsoranzo committed Jul 22, 2016
    43fdafd
  3. @nsoranzo

    Fix Makefile to not rebuild .class files every time

    nsoranzo committed Jul 22, 2016
    402c8e0
  4. @nsoranzo

    Update test output for release 0.2.0

    nsoranzo committed Jul 22, 2016
    6a6eb1c
Commits on Sep 8, 2015

  1. Merge pull request #11 from fangly/patch-1 

    Up-to-date CHANGES file
    committed Sep 8, 2015
    c75ad1f
  2. @fangly

    Up-to-date CHANGES file 

    I added the release notes for MinCED version 0.2.0.
    fangly committed Sep 8, 2015
    190a7c0
Commits on Jul 13, 2015

  1. update the version number 0.2.0

    committed Jul 13, 2015
    fa1111d
Commits on Jul 12, 2015

  1. Added back in the interval search tree, needs testing

    committed Jul 12, 2015
    b579e88

  2. Add in the Interval tree code (again)

    committed Jul 12, 2015
    cbbc55b
Commits on Feb 13, 2015

  1. update readme

    committed Feb 13, 2015
    1be4bc9

  2. add in test target

    committed Feb 13, 2015
    0571a26

  3. quote path variables in shell script

    committed Feb 13, 2015
    3a00b6c

  4. Remove unneeded test files

    committed Feb 13, 2015
    8d43071

  5. added git ignore

    committed Feb 13, 2015
    4725267

  6. Merge branch 'master' of github.com:ctSkennerton/minced

    committed Feb 13, 2015
    0b22286

  7. add version option to help

    committed Feb 13, 2015
    6f0da98
Commits on Nov 20, 2014

  1. Update minced 

    fixed a bug in the shell script
    committed Nov 20, 2014
    17bdaff
Commits on Nov 17, 2014

  1. Follow symlinks in the minced shell script

    committed Nov 17, 2014
    359ec0a
Commits on Jul 19, 2014

  1. Fix off-by-one error. Fixes issue #4

    committed Jul 19, 2014
    6876101
Commits on Apr 3, 2014

  1. Changed the behaviour of the '-spacers' option. 

    Without any output file given the beehaviour is the same as before,
creating a file with the input name'spacers prefix and adding
'_spacers.fa' to the end. Now when an output file is given the
'_spacers.fa' will be appended to that name, not the input file's
name.
    committed Apr 3, 2014
    8bba698
Commits on Nov 20, 2013

  1. Update README

    committed Nov 20, 2013
    7bed91d

  2. change 1.0 to 1 in output format for consistency

    committed Nov 20, 2013
    844c54f

  3. version bump

    committed Nov 20, 2013
    4d85ea5

  4. fixes #3

    committed Nov 20, 2013
    828b0a5

  5. fixes #1

    committed Nov 20, 2013
    79694ed

  6. fixes #2

    committed Nov 20, 2013
    7c8928d
Commits on Nov 19, 2013

  1. Fixed bug in gff output causing header to be printed multiple times

    committed Nov 19, 2013
    29dbe23
Commits on Nov 18, 2013

  1. Minor output format changes

    committed Nov 18, 2013
    bb70cad

  2. remove executable property from source files

    committed Nov 18, 2013
    422aaaf

  3. Add in gff version string

    committed Nov 18, 2013
    9cdc48f

  4. Added in a manifest file and a makefile for command-line installation

    committed Nov 18, 2013
    6bdc6fd

  5. Added in new output formats

    committed Nov 18, 2013
    6cb89d1

  6. Added in a shell wrapper for the jar file

    committed Nov 18, 2013
    f47d000
Commits on Jul 18, 2013

  1. Initial commit

    committed Jul 18, 2013
    26d6dfc