This is a bug fix release that fixes problems with the GFF file reporting. In both the 'gff' and 'gffFull' options the end positions of the CRISPR/repeat sequences was one nucleotide greater than what it should have been that could cause other programs to crash (as well as being just wrong).

Without any output file given the behavior is the same as before,
creating a file with the input name spacers prefix and adding
_spacers.fa to the end. Now when an output file is given the
_spacers.fa will be appended to that name, not the input file's
name.

Download both minced and minced.jar and make sure to keep them in the same directory.

Basic Usage:

cd <download_folder>
chmod +x minced
./minced -h
./minced -gff <file.fasta>

Fixes bugs in the gff formatting found by Torsten Seemann.

Download both minced and minced.jar and make sure to keep them in the same directory.

Basic Usage:

cd <download_folder>
chmod +x minced
./minced -h
./minced -gff <file.fasta>

bug fix release fixing some formatting errors for the gff output.
download both minced and minced.jar and make sure to keep
them in the same directory.

Basic usage:

cd <download_folder>
chmod +x minced
./minced -h
./minced -gff <file.fasta>

See the README file in the source distribution for more information.

better gff output formatting

download both minced and minced.jar and make sure to keep them in the same directory after download.

from the command-line run:

cd <download_folder>
chmod +x minced
./minced -h
./minced -gff <file.fa>

Download the source code for more documentation.

CRT with multi-fasta files and gff output.