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msnotokay <- grep("ms n", only_failed$Failure_Reason)
msokay <- grep("ms o", only_failed$Failure_Reason)
reassigned <- grep("assig", only_failed$Failure_Reason)
baseswap <- grep("base", only_failed$Failure_Reason)
wrongmass <- grep("wrong m", only_failed$Failure_Reason)
flushed <- grep("flush", only_failed$Failure_Reason)
stellaris <- grep("3 stel", only_failed$Failure_Reason)
stellaris <- append(grep("every sample", only_failed$Failure_Reason), stellaris)
stellaris <- append(grep("all samples failed", only_failed$Failure_Reason), stellaris)
stellaris <- append(grep("stellaris f", only_failed$Failure_Reason), stellaris)
stellaris <- append(grep("more then three", only_failed$Failure_Reason), stellaris)
stellaris <- append(grep("more than 3", only_failed$Failure_Reason), stellaris)
extratet <- grep("extra tet", only_failed$Failure_Reason)
bhq3 <- grep("bhq3", only_failed$Failure_Reason)
bhq2 <- grep("bhq2", only_failed$Failure_Reason)
bhq1 <- grep("bhq1", only_failed$Failure_Reason)
poortet <- grep("tet", only_failed$Failure_Reason)

only_failed[poortet,"Five_Prime_mod"] <- "Poor Tet"
only_failed[bhq1,"Five_Prime_mod"] <- "Poor BHQ1"
only_failed[bhq2,"Five_Prime_mod"] <- "Poor BHQ2"
only_failed[bhq3,"Five_Prime_mod"] <- "Poor BHQ3"