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Pinned repositories
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S_Classify-DL-SVMFeat-Train
Cytomine software for image classification with deep features (model builder)
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S_Classify-ML-RandomSubwET-Pred-BI
A Cytomine software for classifying crops with Random subwindows and ExtraTrees (predict)
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S_Classify-ML-RandomSubwET-Train
A Cytomine software for classifying crops with Random subwindows and ExtraTrees (training)
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Cytomine-bootstrap
Forked from cytomine/Cytomine-bootstrapCytomine installation procedure. See @cytomine for official releases.
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Cytomine-Web-UI
Forked from cytomine/Cytomine-Web-UICytomine-WebUI is the officially supported front-end for Cytomine, developed in VueJS. See @cytomine for official releases.
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Cytomine-python-client
Forked from cytomine/Cytomine-python-clientClient to interact with Cytomine API in Python. See @cytomine for official releases.
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S_Stats-TermArea
A Cytomine software to compute area and statistics for specified terms in given images and gather results in a CSV file.
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S_Segment-CV-AdaptThres-Sample
Cytomine software. Segmentation by computer vision using an adaptive threshold on a sample
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Cytomine-java-client
Forked from cytomine/Cytomine-java-clientClient to communicate with Cytomine API in Java. See @cytomine for official releases.
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Cytomine-software-router
Forked from cytomine/Cytomine-software-routerCytomine module for communication between Cytomine-Core and remote processing servers. See @cytomine for official releases.
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Cytomine-project-migrator
Utility to migrate a Cytomine project from a Cytomine instance to another.
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Cytomine-IMS
Forked from cytomine/Cytomine-IMSCytomine-IMS: Image Management System. See @cytomine for official releases.
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Cytomine-core
Forked from cytomine/Cytomine-coreCytomine-Core is the main web server implementing the Cytomine API. See @cytomine for official releases.
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Dockerfiles
Forked from cytomine/DockerfilesDockerfiles used to compile Cytomine docker images. See @cytomine for official releases.
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iipsrv
Forked from cytomine/iipsrviipsrv is an advanced high-performance feature-rich image server for web-based streamed viewing and zooming of ultra high-resolution images.
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Cytomine-BioFormats
Forked from geektortoise/BioFormatsStandAlone -
S_Classify-ML-RandomSubwET-Eval
A Cytomine software for classifying crops with Random subwindows and ExtraTrees (eval)
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Cytomine-sample-projects
A set of sample projects that can be added to any Cytomine instance using the project-migrator
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cytomine-frontend
Forked from mehdyouras/cytomine-frontendFront-end experimentations in VueJS. Basis for a future modernized version of the whole webUI application.
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S_Classify-DL-SVMFeat-Predict-BI
Cytomine software for image classification with deep features (inference)
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S_LandmarkDetect-ML-MSET-Train
Landmark Detection (model training of MSET)
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S_LandmarkDetect-ML-MSET-Pred
Landmark Detection (prediction of MSET)
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pyxit
Implementation of the core algorithms for Random subwindows extraction and Extra-Trees classifiers
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S_Stats-TermAreaIncluded
A Cytomine software to count and compute area of annotations associated to a given term, included in a larger annotation (region of interest). Results are stored in a Cytomine property linked to the region of interest.
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S_Segment-CV-AdaptThres-Object-BI
Detects objects in a big image using adaptive thresholding, tiling, and union
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S_Segment-ML-MultiOutputET-Train
Train a binary segmentation model based on subwindow and multiple output extra-trees
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cytomine-descriptor-helper
A tool for generating descriptor files
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Cytomine-python-datamining
Forked from cytomine/Cytomine-python-dataminingCytomine-Datamining package (including image recognition algorithms) in Python
