Pinned repositories

  1. cytoscape

    Cytoscape: an open source platform for network analysis and visualization

    Shell 160 60

  2. cytoscape-api

    Cytoscape 3 API bundles.

    Java 14 19

  3. cytoscape-impl

    Cytoscape 3 implementation bundles.

    Java 19 30

  4. cytoscape.js

    Graph theory (network) library for visualisation and analysis

    JavaScript 4.7k 842

  5. cyREST

    Forked from idekerlab/cyREST

    Core App: REST API module for Cytoscape

    JavaScript 15 10

  6. cytoscape-tutorials

    Collection of modular Cytoscape tutorials for online presentation using reveal.js

    HTML 44 34

  • Cytoscape 3 implementation bundles.

    Java 19 30 LGPL-2.1 Updated Sep 21, 2018
  • An R/shiny widget for cytoscape.js

    JavaScript 48 13 MIT 1 issue needs help Updated Sep 19, 2018
  • Python utilities for Cytoscape and Cytoscape.js

    Python 98 36 MIT Updated Sep 19, 2018
  • Cytoscape 3 API bundles.

    Java 14 19 LGPL-2.1 Updated Sep 17, 2018
  • Cytoscape3 app to create legends as annotations

    Java Updated Sep 17, 2018
  • The Dagre layout for DAGs and trees for Cytoscape.js

    JavaScript 55 33 MIT Updated Sep 15, 2018
  • New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community

    R 4 4 MIT 1 issue needs help Updated Sep 14, 2018
  • CyNDEx 2: Chromium-based Cytoscape client app for the NDEx database

    Java MIT Updated Sep 14, 2018
  • End to end tests for Cytoscape in Python

    Python 1 Updated Sep 13, 2018
  • Context menu for Cytoscape.js

    JavaScript 58 45 MIT Updated Sep 12, 2018
  • Graph theory (network) library for visualisation and analysis

    JavaScript 4,703 842 MIT Updated Sep 11, 2018
  • Cytoscape 3 desktop version.

    Java 9 10 Updated Sep 11, 2018
  • CX serialization and de-serialization in Cytoscape

    Java 1 Updated Sep 7, 2018
  • A Cytoscape app to interface with the heat diffusion service

    Java 1 1 Updated Sep 6, 2018
  • Collection of modular Cytoscape tutorials for online presentation using reveal.js

    HTML 44 34 CC0-1.0 1 issue needs help Updated Sep 5, 2018
  • Rendering and layout performance test page for Cytoscape.js

    HTML 2 Updated Sep 4, 2018
  • Java 1 Updated Aug 31, 2018
  • JavaScript 4 11 Updated Aug 30, 2018
  • For all your ES6 pre-compiled cytoscape extension testing needs

    JavaScript MIT Updated Aug 30, 2018
  • A CX to Cytoscape JS library

    JavaScript MIT Updated Aug 30, 2018
  • CX serialization and de-serialization

    Java 2 Updated Aug 29, 2018
  • interactive histogram and scatter charts to select nodes or create filters

    Java Updated Aug 26, 2018
  • Cytoscape: an open source platform for network analysis and visualization

    Shell 160 60 Updated Aug 24, 2018
  • Panzoom extension for Cytoscape.js

    CSS 28 21 MIT Updated Aug 21, 2018
  • Edge creation UI extension for Cytoscape.js

    JavaScript 51 40 MIT Updated Aug 17, 2018
  • The Cola.js physics simulation layout for Cytoscape.js

    JavaScript 48 25 MIT Updated Aug 14, 2018
  • The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.

    JavaScript 50 23 MIT Updated Aug 8, 2018
  • Cytoscape App Store web application code

    JavaScript 5 6 Updated Aug 5, 2018
  • Bird's eye view pan and zoom control for Cytoscape.js.

    JavaScript 32 22 MIT Updated Aug 3, 2018
  • Collection of scripts that include programmatic io and control of Cytoscape

    HTML 21 23 CC0-1.0 Updated Aug 2, 2018