Cytoscape Consortium

Repositories

• appstore

  Cytoscape App Store web application code
  JavaScript 11 7 21 0 Updated Jun 5, 2020

• cytoscape.github.com

  Cytoscape org web site.
  HTML 14 20 0 0 Updated Jun 4, 2020

• search-portal

  Frontend code for the Search Portal.
  JavaScript 3 3 1 0 Updated Jun 4, 2020

• cytoscape-impl

  Cytoscape 3 implementation bundles.
  Java LGPL-2.1 33 24 0 0 Updated Jun 3, 2020

• cytoscape.js

  Graph theory (network) library for visualisation and analysis

  javascript analysis network visualisation graph-theory cytoscapejs
  JavaScript 1,235 6,684 6 5 Updated Jun 2, 2020

• cytoscape-tutorials

  Collection of modular Cytoscape tutorials for online presentation using reveal.js
  HTML CC0-1.0 79 154 22 (1 issue needs help) 0 Updated Jun 1, 2020

• cytoscape-explore
  JavaScript MIT 0 4 9 1 Updated Jun 1, 2020

• RCy3

  New version of RCy3, redesigned and collaboratively maintained by Cytoscape developer community
  R MIT 14 20 7 (1 issue needs help) 1 Updated May 29, 2020

• communitydetection-rest-server

  Community Detection REST Service
  Java BSD-3-Clause 1 0 0 1 Updated May 28, 2020

• cytoscape-api

  Cytoscape 3 API bundles.
  Java LGPL-2.1 24 16 0 1 Updated May 26, 2020

• cx

  CX serialization and de-serialization in Cytoscape
  Java 0 1 8 1 Updated May 26, 2020

• cytoscape-admin-scripts

  Build and maintenance scripts for Cytoscape core developers.
  Jupyter Notebook 2 1 1 0 Updated May 27, 2020

• cytoscape.js-blog

  The Cytoscape.js blog, using Github pages and Jekyll
  JavaScript MIT 48 16 0 2 Updated May 26, 2020

• cytoscape-gui-distribution

  Cytoscape 3 desktop version.
  Java 12 12 0 0 Updated May 22, 2020

• cy-ndex-2

  A Cytoscape client app for the NDEx database
  Java MIT 1 0 21 1 Updated May 22, 2020

• cyREST

  Forked from idekerlab/cyREST

  Core App: REST API module for Cytoscape
  JavaScript MIT 25 22 46 0 Updated May 22, 2020

• cytoscape.js-edgehandles

  Edge creation UI extension for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  HTML MIT 60 88 4 2 Updated May 22, 2020

• cytoscape-jupyter-widget

  Cytoscape.js based network visualizer for Jupyter Notebook
  JavaScript 10 27 10 2 Updated May 20, 2020

• cy-community-detection

  Community Detection App for Cytoscape
  Java BSD-3-Clause 0 1 9 0 Updated May 18, 2020

• cx2js-example
  JavaScript 1 0 0 1 Updated May 18, 2020

• diffusion

  A Cytoscape app to interface with the heat diffusion service
  Java 2 2 15 1 Updated May 15, 2020

• cxio

  CX serialization and de-serialization
  Java 0 2 1 1 Updated May 15, 2020

• json

  Core App: JSON support
  Java 1 0 0 1 Updated May 15, 2020

• communitydetection-rest-model
  Java BSD-3-Clause 0 0 0 0 Updated May 14, 2020

• analyzer

  Stripped down version of Network Analyzer core app
  Java 0 0 2 0 Updated May 14, 2020

• cx-viz-converter
  JavaScript MIT 0 0 0 0 Updated May 8, 2020

• cytoscape-automation

  Collection of scripts that include programmatic io and control of Cytoscape
  HTML CC0-1.0 43 48 11 1 Updated May 4, 2020

• cytoscape.js-panzoom

  Panzoom extension for Cytoscape.js

  cytoscapejs cytoscapejs-extension
  CSS MIT 24 43 4 4 Updated Apr 30, 2020

• cyjShiny

  An R/shiny widget for cytoscape.js
  JavaScript MIT 20 69 11 3 Updated Apr 29, 2020

• network-merge

  Core App: Network Merge
  Java LGPL-2.1 1 0 0 2 Updated Apr 29, 2020