Python utilities for Cytoscape and Cytoscape.js
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README.md

py2cytoscape Build Status PyPI version ReadtheDocs DOI

Installation

Latest stable release

pip install py2cytoscape

Development version

pip install git+https://github.com/cytoscape/py2cytoscape.git

Documentation

Package documentation can be found on https://py2cytoscape.readthedocs.io.

For contributing please check the wiki.

Full workflows can be found on the cytoscape/cytoscape-automation repo. The following workflows include cyrest usage:

Citing

Ono, K. et al. (2015) CyREST: Turbocharging Cytoscape Access for External Tools via a RESTful API. F1000Res, 4, 478