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Automates the process of installing R from source and links it to OpenBlas, an optimized BLAS library based on GotoBLAS2.
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README.md
connectir_install.R
install.py

README.md

Rinstall

This program will only work on linux or mac. The main script install.py will download and install R from source as well as download and install OpenBlas from source. OpenBlas is an optimized BLAS library based on GotoBLAS2 that makes matrix operations in R run much faster and in parallel if you have a multicore system.

To install R linked to OpenBlas as well as a library that can control the number of cores used for linear algebra operations from within R, run the command below. Note: the following command will install R into /usr/lib and /usr/bin. To change the output path and/or set options to ./configure see install.py -h.

./install.py    # make sure you are in the Rinstall directory

If you are then interested in making use of my connectir toolbox to conduct connectome-wide association studies, you can run the following command.

./connectir_install.R   # make sure you are in the Rinstall directory
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