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il makefile funziona correttamente

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commit 9baea00f561411e55e52d0052dd1beebdaadf80d 1 parent 4fce6ae
Giovanni Dall'Olio authored November 12, 2008

Showing 1 changed file with 20 additions and 20 deletions. Show diff stats Hide diff stats

  1. 40  Makefile
40  Makefile
... ...
@@ -1,5 +1,5 @@
1 1
 
2  
-INPUTFILES = Resultats_daf_lower_95percent Resultats_maf_lower_95percent Resultats_daf_upper_95percent Resultats_maf_upper_95percent lower_DAF lower_MAF upper_DAF upper_MAF
  2
+INPUTFILES = Resultats_daf_lower_95percent Resultats_maf_lower_95percent Resultats_daf_upper_95percent Resultats_maf_upper_95percent Resultats_lower_daf Resultats_lower_maf Resultats_upper_daf Resultats_upper_maf
3 3
 RESULTSDIR = ./results
4 4
 RESULTFILES = $(addprefix $(RESULTSDIR)/,$(addsuffix _filtered.txt,$(INPUTFILES)))
5 5
 
@@ -8,24 +8,24 @@ help:
8 8
 
9 9
 filter_all: results/lower_DAF_filtered.txt results/lower_MAF_filtered.txt results/upper_DAF_filtered.txt  results/upper_MAF_filtered.txt
10 10
 
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-all: $(RESULTFILES) src/filter_genes.py
  11
+all: $(RESULTFILES) 
12 12
 
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-$(RESULTSDIR)/%_filtered.txt: data/%.txt
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-	python src/filter_genes.py --genes data/Genes.txt --window $^ --output $@
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+$(RESULTSDIR)/%_filtered.txt: data/%.txt src/filter_genes.py
  14
+	python src/filter_genes.py --genes data/Genes.txt --window $< --output $@
15 15
 
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-results/lower_DAF_filtered.txt: data/Resultats_lower_daf.txt data/Genes.txt src/filter_genes.py
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-	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_lower_daf.txt --output results/lower_DAF_filtered.txt
18  
-	@echo "Results created in $@"
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-	
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-results/lower_MAF_filtered.txt: data/Resultats_lower_maf.txt data/Genes.txt src/filter_genes.py
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-	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_lower_maf.txt --output results/lower_MAF_filtered.txt
22  
-	@echo "Results created in $@"
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-	
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-results/upper_DAF_filtered.txt: data/Resultats_upper_daf.txt data/Genes.txt src/filter_genes.py
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-	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_upper_daf.txt --output results/upper_DAF_filtered.txt
26  
-	@echo "Results created in $@"
27  
-	
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-results/upper_MAF_filtered.txt: data/Resultats_upper_maf.txt data/Genes.txt src/filter_genes.py
29  
-	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_upper_maf.txt --output results/upper_MAF_filtered.txt
30  
-	@echo "Results created in $@"
31  
-	
  16
+#results/lower_DAF_filtered.txt: data/Resultats_lower_daf.txt data/Genes.txt src/filter_genes.py
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+#	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_lower_daf.txt --output results/lower_DAF_filtered.txt
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+#	@echo "Results created in $@"
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+#	
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+#results/lower_MAF_filtered.txt: data/Resultats_lower_maf.txt data/Genes.txt src/filter_genes.py
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+#	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_lower_maf.txt --output results/lower_MAF_filtered.txt
  22
+#	@echo "Results created in $@"
  23
+#	
  24
+#results/upper_DAF_filtered.txt: data/Resultats_upper_daf.txt data/Genes.txt src/filter_genes.py
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+#	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_upper_daf.txt --output results/upper_DAF_filtered.txt
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+#	@echo "Results created in $@"
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+#	
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+#results/upper_MAF_filtered.txt: data/Resultats_upper_maf.txt data/Genes.txt src/filter_genes.py
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+#	python src/filter_genes.py --genes data/Genes.txt --window data/Resultats_upper_maf.txt --output results/upper_MAF_filtered.txt
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+#	@echo "Results created in $@"
  31
+#	

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