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Dan Allan danielballan

Scientific software developer at a giant X-ray beam. Living in Baltimore, frequently found on the train to New York.

Brookhaven National Lab
Baltimore
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http://www.danallan.com

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Scientific software developer at a giant X-ray beam. Living in Baltimore, frequently found on the train to New York.

Brookhaven National Lab
Baltimore
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http://www.danallan.com

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Pinned

scientific-python-cookiecutter

Forked from NSLS-II/scientific-python-cookiecutter

a tutorial and 'cookiecutter' template for packing scientific Python code

Python
bluesky/bluesky

experiment orchestration and data acquisition

Python 53 41
caproto/caproto

a bring-your-own-IO implementation of the EPICS Channel Access protocol

Python 15 25
photomosaic

Assemble thumbnail-sized images from a large collection into a tiling which, viewed at a distance, gives the impression of one large photo.

Python 47 12
trackpy

Forked from soft-matter/trackpy

A pure python implementation of Crocker-Grier for single particle tracking

Python 1
jupyterhub-share-link

Share notebooks between users in a Hub.

Python 15 3

3,903 contributions in the last year

Contribution activity

May 2020

danielballan/mybinder.org-deploy Jupyter Notebook May 19
danielballan/deployAD May 4

Created a pull request in bluesky/ophyd that received 5 comments

Let wait_for_connection() return self instead of None.

Now that we find ourselves adding wait_for_connection() in more places, it would be convenient to be able to do it in one statement: x = SomeSignal…

+51 −5 • 5 comments

Spell out acronyms. May 20
Document nbstripout. May 20
Polish xarray notebooks. May 19
Reorder a bit; change a caption. May 19
Fix up plots and RE in loop. May 19
Hotfix title May 18
Add exercise solution and links. May 18
Remove some unmaintained notebooks. May 15
Suggest 'python -m pip' May 15
Capitalize Bluesky in this usage. May 15
Refactor to use SingleRunCache. May 15
Use PNG figures. May 15
Add databroker v2 notebook May 15
Update export notebook. May 14
Maybe installing netifaces removes need for env vars. May 14
Update README. May 14
Add xarray example from NIST. May 13
Update requirement, tweak XAFS example. May 13
Improve setup instructions based on feedback from @bruceravel. May 11
First pass with @danolds May 8
Re-instate LivePlot (just not DerivedPlot). May 8

Release notes for 1.5.1 May 12
Avoid closing over self in the finalizers. May 12
CI: Add Python 3.8 builds. May 6
Log status callback exceptions May 6
Update release notes for 1.5.0 May 1

Fix misclassified item in changelog. May 22
Adjust for Entry unification May 21
Prototype SingleRunCache May 11
Try __getitem__ again with a forced reload. May 7

Remove catalogs package for now. May 11
Jinja templating requires double brackets. May 9
Fix typo in catalog.yml. May 8
Fix typo May 8

Address new flake8 errors. May 22
Update release notes and tutorial for 1.6.1. May 6
Sync release notes from 1.5.x branch. May 1

Address deprecation warning from jupyter_sphinx. May 22

Remove special case for now-completed workshop. May 19

Bump to 1.6.1 May 8

REF: Use a more direct way to check if database is given. May 6

Add support for unpacking into MongoDB and for merging packs into one catalog. May 4

Bump to v0.5.0 May 1

Bump versino to 1.5.0. May 1

Release notes for 0.5.0 May 1

Update anatomy of a device May 18
FIX: make plot in mono notebook "live" May 13
Hello bluesky doc update May 13

verify nd step for scan_nd back compatibility May 5
ENH: fly will return uid May 1

New Client API of Olog by httpx May 22

Let users never see Entry objects May 21

Prevent recursion back to same catalog when looking for attrs May 14

Add size estimates to File and Memory Managers May 4

Created an issue in bluesky/bluesky that received 5 comments

Write down an official recommendation for how to use bluesky safely in Jupyter

Copied from the Nikea Slack: The concern about running bluesky in Jupyter for real experiments (as opposed to teaching/training/simulation with sy…

5 comments

Merge in APS Lesson 5 and Lesson 5 Advanced May 21
Use databroker for data access in NIST notebooks. May 14
Revisit data caching May 14
Users' Meeting 2020 prep tracking issue May 14
Overhaul Tracking Issue May 13

Intermediate component for bundling archiver data into a Run May 19
Make an example for how to access an array within a run. May 19
Develop a MultiRunCache May 19

CI failure on back-port branch May 22

Do not require collect_asset_docs method. May 14

Evaluate moving from requests to httpx May 4

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