A modular, containerized pipeline for ATAC-seq data processing
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BiocProject update vignette, see #73 Dec 21, 2018
anno
containers add samblaster Jan 3, 2019
docs
examples
pipelines Zip unmapped files; #71 Dec 21, 2018
tests Rename pipeline files to pepatac Jun 25, 2018
tools
.gitignore update to ignore jekyll stuff Nov 1, 2018
CHANGELOG.md update prior to release Jan 3, 2019
Makefile Rename pipeline files to pepatac Jun 25, 2018
README.md Merge pull request #75 from databio/dev Jan 3, 2019
example_cmd.txt
pipeline_interface.yaml
requirements-test.txt add test reqs file Jul 14, 2017
requirements.txt
update_usage_docs.sh
usage.txt make cmd echo consistent; update usage Nov 15, 2018

README.md