diff --git a/episodes/05-writing-scripts.md b/episodes/05-writing-scripts.md index d8503843..fb7904d4 100644 --- a/episodes/05-writing-scripts.md +++ b/episodes/05-writing-scripts.md @@ -330,16 +330,12 @@ using a transfer program, it needs to be installed on your local machine, not yo ## Transferring Data Between your Local Machine and the Cloud -If you're using Windows with PuTTY instead of Git Bash, please select the alternative option here: - +::::::::::::::: spoiler -
- -### Uploading Data to your Virtual Machine with scp +### SCP `scp` stands for 'secure copy protocol', and is a widely used UNIX tool for moving files between computers. The simplest way to use `scp` is to run it in your local terminal, @@ -388,16 +384,19 @@ $ scp dcuser@ip.address:/home/dcuser/shell_data/untrimmed_fastq/scripted_bad_rea Remember that in both instances, the command is run from your local machine, we've just flipped the order of the to and from parts of the command. -
+::::::::::::::::::::::: + +If you are using Windows without Git Bash on your local machine, you can use `pscp.exe` +to upload data to your virtual machine. -
+::::::::::::::: spoiler -### Uploading Data to your Virtual Machine with PSCP +### PCSP If you're using a Windows PC without Git Bash, we recommend you use the *PSCP* program. This program is from the same suite of tools as the PuTTY program we have been using to connect. -1. If you haven't done so, download pscp from [http://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe](https://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe) +1. If you haven't done so, download *PSCP* from [http://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe](https://the.earth.li/~sgtatham/putty/latest/x86/pscp.exe) 2. Make sure the *PSCP* program is somewhere you know on your computer. In this case, your Downloads folder is appropriate. 3. Open the windows [PowerShell](https://en.wikipedia.org/wiki/Windows_PowerShell); @@ -426,7 +425,7 @@ C:\User\your-pc-username\Downloads> pscp.exe dcuser@ec2-54-88-126-85.compute-1.a C:\User\your-pc-username\Downloads ``` -
+::::::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: keypoints @@ -434,5 +433,3 @@ C:\User\your-pc-username\Downloads - Transferring information to and from virtual and local computers. :::::::::::::::::::::::::::::::::::::::::::::::::: - -