From 85ff04168b0bdf592804696d44bf2375da30f09b Mon Sep 17 00:00:00 2001
From: Davis Vann Bennett <davis.v.bennett@gmail.com>
Date: Tue, 16 Sep 2025 21:06:12 +0200
Subject: [PATCH 1/2] update test workflow to use src layout

---
 .github/workflows/test.yaml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/test.yaml b/.github/workflows/test.yaml
index 196ddec22..e1e28a1c8 100644
--- a/.github/workflows/test.yaml
+++ b/.github/workflows/test.yaml
@@ -6,7 +6,7 @@ on:
       - "!gh-pages" # exclude gh-pages branch
       - "!stage*" # exclude branches beginning with stage
     paths:
-      - "datajoint"
+      - "src/datajoint"
       - "tests"
   pull_request:
     branches:
@@ -14,7 +14,7 @@ on:
       - "!gh-pages" # exclude gh-pages branch
       - "!stage*" # exclude branches beginning with stage
     paths:
-      - "datajoint"
+      - "src/datajoint"
       - "tests"
 jobs:
   test:

From 2007f335df8fc67a08e306aee43dead67f5ba3e6 Mon Sep 17 00:00:00 2001
From: Davis Vann Bennett <davis.v.bennett@gmail.com>
Date: Tue, 16 Sep 2025 23:13:02 +0200
Subject: [PATCH 2/2] update hook invocations to use src layout

---
 .pre-commit-config.yaml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 4a58e0483..ccf72ed80 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -30,7 +30,7 @@ repos:
   rev: 25.1.0 # matching versions in pyproject.toml and github actions
   hooks:
   - id: black
-    args: ["--check", "-v", "datajoint", "tests", "--diff"] # --required-version is conflicting with pre-commit
+    args: ["--check", "-v", "src", "tests", "--diff"] # --required-version is conflicting with pre-commit
 - repo: https://github.com/PyCQA/flake8
   rev: 7.3.0
   hooks:
@@ -41,7 +41,7 @@ repos:
       - --count
       - --show-source
       - --statistics
-    files: datajoint # a lot of files in tests are not compliant
+    files: src/ # a lot of files in tests are not compliant
   # style tests
   - id: flake8
     args:
@@ -51,7 +51,7 @@ repos:
       - --max-line-length=127
       - --statistics
       - --per-file-ignores=datajoint/diagram.py:C901
-    files: datajoint # a lot of files in tests are not compliant
+    files: src/ # a lot of files in tests are not compliant
 - repo: https://github.com/rhysd/actionlint
   rev: v1.7.7
   hooks: