Prediction tasks specification

[kmualim]

Hi,

Thank you for making the code available!
The basset model has an output of 164, representing the predicted probability of accessibility in each cell type.
Perhaps I might have missed it while reading the paper but I was wondering if the 164 celltypes are made available somewhere as I'd like to extract/use task-specific representations.

Thanks!

[davek44]

I added a file called targets.txt that describes each of those cell types. The full path is data/models/targets.txt. If you want the BED files themselves, you data/get_dnase.sh