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Popular repositories

  1. CRISPRDetect_2.4 CRISPRDetect_2.4 Public

    Updated version of CRISPRDetect.

    3 1

  2. PredictTerm PredictTerm Public

    A machine-learning based tool to predict intrinsic and Rho-dependent transcription terminators.

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  3. TracrPredictor TracrPredictor Public

    This application finds tracrRNA genes in a genome with previously annotated CDS. Reference: Chyou D. T. and Brown C. M. (2018): Prediction and diversity of tracrRNAs from type II CRISPR-Cas systems…



    Presence of CRISPR-Cas systems, anti-CRISPR genes and antibiotic resistance genes in RefSeq bacterial genomes, including R scripts for testing the associations between them.

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  5. CRISPRHost CRISPRHost Public

    Predict viral hosts by BLASTN sequence alignment using CRISPR spacers.

    Perl 1

  6. CRISPRTarget_express CRISPRTarget_express Public

    A simple script that computes essential data of CRISPR spacer targets in genomes, that the web application CRISPRTarget generates.

    Shell 1