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1. parametric_barrels parametric_barrels Public

   Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.

   Python 13 1

2. autograft autograft Public

   A python script package that can identify a beta-hairpin loop that interacts with a target protein from a PDB complex and attempts to graft the loop onto a set of scaffolds in context of the target…

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3. generate2dstrandmap generate2dstrandmap Public

   This script generates a 2d strand pairing map given a PDB of a simple up-down beta barrel.

   Python 1

4. ppi_iterative_opt ppi_iterative_opt Public

   Protein protein interaction iterative optimization strategy to improve Alphafold2 validation metrics.

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5. WRAPs WRAPs Public

   Water-soluble RFdiffused Amphipathic Proteins (WRAPs)

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6. sushimaki sushimaki Public

   A script package to generate helical or beta barrel WRAPs (Water-soluble RFdiffused Amphipathic Proteins) parametrically around a target. WRAPs can be used to solubilize transmembrane proteins and/…

   Python 1