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Example1_RenderingSectionOverviewEMdataWithPlanes
Example2_RenderingIsotropicEMdataWithZBstackAndPlane
Example3_RenderingIsotropicEMdataWithZBstackAndReconstructionsAndPlane
Example4_RenderingIsotropicEMdataWithResliceCutaways
Example5_FlattenedContourReslice
Vivaldi @ 7f74c09
README.md

README.md

Hildebrand16 visualization

Included here are simplified examples for the volume renderings and visualizations associated with the Hildebrand16 database.

All examples are implemented in Vivaldi and developed in collaboration with Woohyuk Choi and the High-performance Visual Computing Lab at the Ulsan National Institute of Science and Technology (UNIST).

Example results

Example 1: Volume rendering of section overviews from ssEM data with planes

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Example 2: Volume rendering of nearly isotropic ssEM data with co-registered fluorescence image stack and plane

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Example 3: Volume rendering of nearly isotropic ssEM data with co-registered fluorescence image stack, plane, and a subset of myelinated neuron reconstructions

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Example 4: Volume rendering of nearly isotropic ssEM data with reslice cut-away views

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Example 5: Flattened contour reslice

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Example data

Data used to generate these simplified examples is available for download.