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  1. bwa

    Forked from lh3/bwa

    Burrow-Wheeler Aligner

    C 2

  2. mmonitor

    Very simple memory monitor

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  3. htslib

    Forked from samtools/htslib

    C library for high-throughput sequencing data formats. This is not the official repository, see samtools/htslib for that.

    C

  4. samtools

    Forked from samtools/samtools

    This is not the official development repository for samtools. For that you should use samtools/samtools.

    C

  5. ref-cache-nginx

    Configuration files for the nginx web server to make a CRAM reference sequence cache

  6. pthread_mon

    Pthreads locking monitor

    C

100 contributions in the last year

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Contribution activity First pull request First issue First repository Joined GitHub

April 2017

Created an issue in samtools/hts-specs that received 13 comments

SAMtags does not include BD and BI

While looking at some CRAM files that had been through GATK realigner, I noticed that they included BD:Z and BI:Z aux tags. These tags do not appea…

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