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Pre-requisites
==============
OS/X Package Installs
---------------------
homebrew -- http://mxcl.github.com/homebrew/
>> ruby -e "$(curl -fsSL https://raw.github.com/mxcl/homebrew/go)"
>> brew install swig ## For redland-bindings install
First install:
--------------
Python 2.7 (+ virtualenv)
setuptools (incl. with virtualenv)
http://pypi.python.org/pypi/virtualenv
Redland RDF Library (http://librdf.org/):
raptor (2.0.8)
rasqal (0.9.30)
redland (1.0.16) [ = librdf ]
>> brew install redland ## Installs dependencies
redland-bindings (1.0.16.1) (Python) [ DJB tweaks...]
./configure --with-python=/Users/dave/biosignalml/PYTHON/bin/python \
--with-python-ldflags="-lpython2.7 -bundle"
HDF5:
=====
HDF5 1.8 http://www.hdfgroup.org/HDF5/
>> brew install hdf5
'h5py >= 2.1.1',
WFDB:
=====
PhysioTools:
WFDB library (10.5.17) http://www.physionet.org/physiotools/wfdb.shtml#sources
WFDB SWIG (Python bindings) (10.5.0) http://www.physionet.org/physiotools/wfdb-swig.shtml
Then:
-----
>> pip install numpy
>> pip install biosignalml
Will also install:
Python easy_install:
isodate (0.4.7)
pyparsing (1.5.7)
httplib2 (0.7.7)
python-dateutil (2.0)
ws4py (0.2.4)
pint (0.1.3-djb)
## For stream re-sampling...
libsamplerate (0.1.8) http://www.mega-nerd.com/SRC/download.html
>> brew install libsamplerate
Utilities:
----------
easy_install
docopt (0.6.1)
Documentation
-------------
## 'docutils >= 0.3', ## For ReST documentation
Server:
-------
easy_install tornado (2.4.1)
Triple Store
------------
Virtuoso (or 4store)
Configuration (when using -- specifying repository)