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Build, view, share, and embed pathway maps.
Model service which takes care of adjusting model according to incoming messages and returns information such as fluxes, theoretical maximum yields, etc
The storage for metabolic models used by the platform
A cookiecutter based on cookiecutter-pypackage for python packages in DD-DeCaF
Angular single page application for uploading models and viewing reports.
The storage for the experimental data used for modeling: omics, strains, media etc
A fork of the original webservice for deployment on the DD-DeCaF Kubernetes cluster.
Base Docker image(s) for WSGI microservices in the DD-DeCaF organization
A cookiecutter template for creating microservices with Flask-RESTPlus.
A simple static file server to answer let's encrypt challenges for our domains.
Identity and access management
Match given gene name with reactions list
Abstraction layer for the DD-DeCaF warehouse
Frontend for running heterologous pathways predictions
ID mapper for biological entities (metabolites, reactions, genes, etc)
Predict heterologous pathways for the given organism and chemical of interest
Web based Registry platform for managing synthetic biological parts
uploading data to dd-decaf
Power model service with ILoop data
Kubernetes deployment for ILoop service
Simple nginx proxy in and the corresponding Dockerfile to relay calls securely to the bigg API