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Version 1.1 

Various bug fixes, including the better treatment of missing data and
issues with family and language names.
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1 parent 78b5539 commit d2de2913688255a0976437410e983cb922a95375 @ddediu committed May 8, 2017
Unified Split
Showing with 418,215 additions and 850,159 deletions.
  1. 0 code/.Rhistory
  2. +223 −60 code/FamilyTrees.R
  3. 0 code/MatchTreesToData.R
  4. 0 code/README.md
  5. +47 −192 code/StandardizedTrees.R
  6. +2 −2 output/autotyp/autotyp-newick-constant=1.00.csv
  7. +146 −146 output/autotyp/autotyp-newick-ga+asjp16.csv
  8. +176 −176 output/autotyp/autotyp-newick-ga+autotyp.csv
  9. +174 −174 output/autotyp/autotyp-newick-ga+geo.csv
  10. +176 −176 output/autotyp/autotyp-newick-ga+mg2015(autotyp).csv
  11. +168 −168 output/autotyp/autotyp-newick-ga+wals(euclidean).csv
  12. +168 −168 output/autotyp/autotyp-newick-ga+wals(euclidean,mode).csv
  13. +168 −168 output/autotyp/autotyp-newick-ga+wals(gower).csv
  14. +168 −168 output/autotyp/autotyp-newick-ga+wals(gower,mode).csv
  15. +2 −2 output/autotyp/autotyp-newick-grafen.csv
  16. +53 −53 output/autotyp/autotyp-newick-nj+asjp16.csv
  17. +98 −98 output/autotyp/autotyp-newick-nj+autotyp.csv
  18. +64 −64 output/autotyp/autotyp-newick-nj+geo.csv
  19. +79 −79 output/autotyp/autotyp-newick-nj+mg2015(autotyp).csv
  20. +105 −105 output/autotyp/autotyp-newick-nj+wals(euclidean).csv
  21. +64 −64 output/autotyp/autotyp-newick-nj+wals(euclidean,mode).csv
  22. +105 −105 output/autotyp/autotyp-newick-nj+wals(gower).csv
  23. +64 −64 output/autotyp/autotyp-newick-nj+wals(gower,mode).csv
  24. +146 −146 output/autotyp/autotyp-newick-nnls+asjp16.csv
  25. +176 −176 output/autotyp/autotyp-newick-nnls+autotyp.csv
  26. +174 −174 output/autotyp/autotyp-newick-nnls+geo.csv
  27. +176 −176 output/autotyp/autotyp-newick-nnls+mg2015(autotyp).csv
  28. +168 −168 output/autotyp/autotyp-newick-nnls+wals(euclidean).csv
  29. +168 −168 output/autotyp/autotyp-newick-nnls+wals(euclidean,mode).csv
  30. +168 −168 output/autotyp/autotyp-newick-nnls+wals(gower).csv
  31. +168 −168 output/autotyp/autotyp-newick-nnls+wals(gower,mode).csv
  32. +2 −2 output/autotyp/autotyp-newick-proportional=1.00.csv
  33. +2 −2 output/autotyp/autotyp-newick.csv
  34. +4,260 −4,261 output/autotyp/autotyp-nexus-constant=1.00.nex
  35. +2,651 −2,652 output/autotyp/autotyp-nexus-ga+asjp16.nex
  36. +989 −3,416 output/autotyp/autotyp-nexus-ga+autotyp.nex
  37. +3,413 −3,414 output/autotyp/autotyp-nexus-ga+geo.nex
  38. +3,571 −3,572 output/autotyp/autotyp-nexus-ga+mg2015(autotyp).nex
  39. +1,523 −2,878 output/autotyp/autotyp-nexus-ga+wals(euclidean).nex
  40. +2,992 −2,993 output/autotyp/autotyp-nexus-ga+wals(euclidean,mode).nex
  41. +1,523 −2,878 output/autotyp/autotyp-nexus-ga+wals(gower).nex
  42. +2,992 −2,993 output/autotyp/autotyp-nexus-ga+wals(gower,mode).nex
  43. +4,260 −4,261 output/autotyp/autotyp-nexus-grafen.nex
  44. +365 −365 output/autotyp/autotyp-nexus-nj+asjp16.nex
  45. +607 −228 output/autotyp/autotyp-nexus-nj+autotyp.nex
  46. +432 −432 output/autotyp/autotyp-nexus-nj+geo.nex
  47. +575 −575 output/autotyp/autotyp-nexus-nj+mg2015(autotyp).nex
  48. +1,652 −687 output/autotyp/autotyp-nexus-nj+wals(euclidean).nex
  49. +391 −391 output/autotyp/autotyp-nexus-nj+wals(euclidean,mode).nex
  50. +1,652 −687 output/autotyp/autotyp-nexus-nj+wals(gower).nex
  51. +391 −391 output/autotyp/autotyp-nexus-nj+wals(gower,mode).nex
  52. +2,669 −2,670 output/autotyp/autotyp-nexus-nnls+asjp16.nex
  53. +1,099 −1,969 output/autotyp/autotyp-nexus-nnls+autotyp.nex
  54. +3,435 −3,436 output/autotyp/autotyp-nexus-nnls+geo.nex
  55. +3,571 −3,572 output/autotyp/autotyp-nexus-nnls+mg2015(autotyp).nex
  56. +1,636 −1,694 output/autotyp/autotyp-nexus-nnls+wals(euclidean).nex
  57. +3,019 −3,020 output/autotyp/autotyp-nexus-nnls+wals(euclidean,mode).nex
  58. +1,636 −1,694 output/autotyp/autotyp-nexus-nnls+wals(gower).nex
  59. +3,019 −3,020 output/autotyp/autotyp-nexus-nnls+wals(gower,mode).nex
  60. +4,260 −4,261 output/autotyp/autotyp-nexus-proportional=1.00.nex
  61. +4,260 −4,261 output/autotyp/autotyp-nexus.nex
  62. +839 −839 output/code_mappings_iso_wals_autotyp_glottolog.csv
  63. +69 −69 output/ethnologue/ethnologue-newick-constant=1.00.csv
  64. +100 −100 output/ethnologue/ethnologue-newick-ga+asjp16.csv
  65. +101 −101 output/ethnologue/ethnologue-newick-ga+autotyp.csv
  66. +132 −132 output/ethnologue/ethnologue-newick-ga+geo.csv
  67. +134 −134 output/ethnologue/ethnologue-newick-ga+mg2015(ethnologue).csv
  68. +97 −97 output/ethnologue/ethnologue-newick-ga+wals(euclidean).csv
  69. +97 −97 output/ethnologue/ethnologue-newick-ga+wals(euclidean,mode).csv
  70. +97 −97 output/ethnologue/ethnologue-newick-ga+wals(gower).csv
  71. +97 −97 output/ethnologue/ethnologue-newick-ga+wals(gower,mode).csv
  72. +69 −69 output/ethnologue/ethnologue-newick-grafen.csv
  73. +60 −60 output/ethnologue/ethnologue-newick-nj+asjp16.csv
  74. +67 −67 output/ethnologue/ethnologue-newick-nj+autotyp.csv
  75. +86 −86 output/ethnologue/ethnologue-newick-nj+geo.csv
  76. +90 −90 output/ethnologue/ethnologue-newick-nj+mg2015(ethnologue).csv
  77. +71 −71 output/ethnologue/ethnologue-newick-nj+wals(euclidean).csv
  78. +62 −62 output/ethnologue/ethnologue-newick-nj+wals(euclidean,mode).csv
  79. +71 −71 output/ethnologue/ethnologue-newick-nj+wals(gower).csv
  80. +62 −62 output/ethnologue/ethnologue-newick-nj+wals(gower,mode).csv
  81. +100 −100 output/ethnologue/ethnologue-newick-nnls+asjp16.csv
  82. +101 −101 output/ethnologue/ethnologue-newick-nnls+autotyp.csv
  83. +132 −132 output/ethnologue/ethnologue-newick-nnls+geo.csv
  84. +134 −134 output/ethnologue/ethnologue-newick-nnls+mg2015(ethnologue).csv
  85. +97 −97 output/ethnologue/ethnologue-newick-nnls+wals(euclidean).csv
  86. +97 −97 output/ethnologue/ethnologue-newick-nnls+wals(euclidean,mode).csv
  87. +97 −97 output/ethnologue/ethnologue-newick-nnls+wals(gower).csv
  88. +97 −97 output/ethnologue/ethnologue-newick-nnls+wals(gower,mode).csv
  89. +69 −69 output/ethnologue/ethnologue-newick-proportional=1.00.csv
  90. +69 −69 output/ethnologue/ethnologue-newick.csv
  91. +10,010 −10,009 output/ethnologue/ethnologue-nexus-constant=1.00.nex
  92. +4,001 −4,001 output/ethnologue/ethnologue-nexus-ga+asjp16.nex
  93. +1,284 −3,512 output/ethnologue/ethnologue-nexus-ga+autotyp.nex
  94. +7,438 −7,438 output/ethnologue/ethnologue-nexus-ga+geo.nex
  95. +8,648 −8,648 output/ethnologue/ethnologue-nexus-ga+mg2015(ethnologue).nex
  96. +1,522 −3,246 output/ethnologue/ethnologue-nexus-ga+wals(euclidean).nex
  97. +2,110 −2,110 output/ethnologue/ethnologue-nexus-ga+wals(euclidean,mode).nex
  98. +1,522 −3,246 output/ethnologue/ethnologue-nexus-ga+wals(gower).nex
  99. +2,111 −2,111 output/ethnologue/ethnologue-nexus-ga+wals(gower,mode).nex
  100. +10,010 −10,009 output/ethnologue/ethnologue-nexus-grafen.nex
  101. +1,236 −1,236 output/ethnologue/ethnologue-nexus-nj+asjp16.nex
  102. +395 −214 output/ethnologue/ethnologue-nexus-nj+autotyp.nex
  103. +2,568 −2,568 output/ethnologue/ethnologue-nexus-nj+geo.nex
  104. +2,640 −2,640 output/ethnologue/ethnologue-nexus-nj+mg2015(ethnologue).nex
  105. +1,660 −478 output/ethnologue/ethnologue-nexus-nj+wals(euclidean).nex
  106. +534 −534 output/ethnologue/ethnologue-nexus-nj+wals(euclidean,mode).nex
  107. +1,660 −478 output/ethnologue/ethnologue-nexus-nj+wals(gower).nex
  108. +534 −534 output/ethnologue/ethnologue-nexus-nj+wals(gower,mode).nex
  109. +3,955 −3,955 output/ethnologue/ethnologue-nexus-nnls+asjp16.nex
  110. +1,333 −709 output/ethnologue/ethnologue-nexus-nnls+autotyp.nex
  111. +7,387 −7,387 output/ethnologue/ethnologue-nexus-nnls+geo.nex
  112. +8,608 −8,608 output/ethnologue/ethnologue-nexus-nnls+mg2015(ethnologue).nex
  113. +1,562 −823 output/ethnologue/ethnologue-nexus-nnls+wals(euclidean).nex
  114. +2,050 −2,050 output/ethnologue/ethnologue-nexus-nnls+wals(euclidean,mode).nex
  115. +1,562 −823 output/ethnologue/ethnologue-nexus-nnls+wals(gower).nex
  116. +2,050 −2,050 output/ethnologue/ethnologue-nexus-nnls+wals(gower,mode).nex
  117. +10,010 −10,009 output/ethnologue/ethnologue-nexus-proportional=1.00.nex
  118. +10,010 −10,009 output/ethnologue/ethnologue-nexus.nex
  119. +51 −51 output/glottolog/glottolog-newick-constant=1.00.csv
  120. +123 −123 output/glottolog/glottolog-newick-ga+asjp16.csv
  121. +109 −109 output/glottolog/glottolog-newick-ga+autotyp.csv
  122. +193 −193 output/glottolog/glottolog-newick-ga+geo.csv
  123. +274 −274 output/glottolog/glottolog-newick-ga+mg2015(glottolog).csv
  124. +101 −101 output/glottolog/glottolog-newick-ga+wals(euclidean).csv
  125. +101 −101 output/glottolog/glottolog-newick-ga+wals(euclidean,mode).csv
  126. +101 −101 output/glottolog/glottolog-newick-ga+wals(gower).csv
  127. +101 −101 output/glottolog/glottolog-newick-ga+wals(gower,mode).csv
  128. +51 −51 output/glottolog/glottolog-newick-grafen.csv
  129. +41 −41 output/glottolog/glottolog-newick-nj+asjp16.csv
  130. +52 −52 output/glottolog/glottolog-newick-nj+autotyp.csv
  131. +64 −64 output/glottolog/glottolog-newick-nj+geo.csv
  132. +115 −115 output/glottolog/glottolog-newick-nj+mg2015(glottolog).csv
  133. +57 −57 output/glottolog/glottolog-newick-nj+wals(euclidean).csv
  134. +40 −40 output/glottolog/glottolog-newick-nj+wals(euclidean,mode).csv
  135. +57 −57 output/glottolog/glottolog-newick-nj+wals(gower).csv
  136. +40 −40 output/glottolog/glottolog-newick-nj+wals(gower,mode).csv
  137. +123 −123 output/glottolog/glottolog-newick-nnls+asjp16.csv
  138. +109 −109 output/glottolog/glottolog-newick-nnls+autotyp.csv
  139. +193 −193 output/glottolog/glottolog-newick-nnls+geo.csv
  140. +274 −274 output/glottolog/glottolog-newick-nnls+mg2015(glottolog).csv
  141. +101 −101 output/glottolog/glottolog-newick-nnls+wals(euclidean).csv
  142. +101 −101 output/glottolog/glottolog-newick-nnls+wals(euclidean,mode).csv
  143. +101 −101 output/glottolog/glottolog-newick-nnls+wals(gower).csv
  144. +101 −101 output/glottolog/glottolog-newick-nnls+wals(gower,mode).csv
  145. +51 −51 output/glottolog/glottolog-newick-proportional=1.00.csv
  146. +51 −51 output/glottolog/glottolog-newick.csv
  147. +22,854 −22,855 output/glottolog/glottolog-nexus-constant=1.00.nex
  148. +2,583 −2,584 output/glottolog/glottolog-nexus-ga+asjp16.nex
  149. +720 −1,800 output/glottolog/glottolog-nexus-ga+autotyp.nex
  150. +7,219 −7,220 output/glottolog/glottolog-nexus-ga+geo.nex
  151. +22,521 −22,522 output/glottolog/glottolog-nexus-ga+mg2015(glottolog).nex
  152. +751 −1,601 output/glottolog/glottolog-nexus-ga+wals(euclidean).nex
  153. +1,442 −1,443 output/glottolog/glottolog-nexus-ga+wals(euclidean,mode).nex
  154. +751 −1,601 output/glottolog/glottolog-nexus-ga+wals(gower).nex
  155. +1,442 −1,443 output/glottolog/glottolog-nexus-ga+wals(gower,mode).nex
  156. +22,854 −22,855 output/glottolog/glottolog-nexus-grafen.nex
  157. +94 −94 output/glottolog/glottolog-nexus-nj+asjp16.nex
  158. +122 −62 output/glottolog/glottolog-nexus-nj+autotyp.nex
  159. +872 −872 output/glottolog/glottolog-nexus-nj+geo.nex
  160. +8,114 −8,114 output/glottolog/glottolog-nexus-nj+mg2015(glottolog).nex
  161. +699 −210 output/glottolog/glottolog-nexus-nj+wals(euclidean).nex
  162. +34 −34 output/glottolog/glottolog-nexus-nj+wals(euclidean,mode).nex
  163. +715 −210 output/glottolog/glottolog-nexus-nj+wals(gower).nex
  164. +34 −34 output/glottolog/glottolog-nexus-nj+wals(gower,mode).nex
  165. +2,578 −2,579 output/glottolog/glottolog-nexus-nnls+asjp16.nex
  166. +799 −489 output/glottolog/glottolog-nexus-nnls+autotyp.nex
  167. +7,219 −7,220 output/glottolog/glottolog-nexus-nnls+geo.nex
  168. +22,521 −22,522 output/glottolog/glottolog-nexus-nnls+mg2015(glottolog).nex
  169. +828 −530 output/glottolog/glottolog-nexus-nnls+wals(euclidean).nex
  170. +1,449 −1,450 output/glottolog/glottolog-nexus-nnls+wals(euclidean,mode).nex
  171. +828 −530 output/glottolog/glottolog-nexus-nnls+wals(gower).nex
  172. +1,449 −1,450 output/glottolog/glottolog-nexus-nnls+wals(gower,mode).nex
  173. +22,854 −22,855 output/glottolog/glottolog-nexus-proportional=1.00.nex
  174. +22,854 −22,855 output/glottolog/glottolog-nexus.nex
  175. +0 −420,850 output/tree_comparisons_between_methods.csv
  176. +91 −91 output/wals/wals-newick-ga+asjp16.csv
  177. +105 −105 output/wals/wals-newick-ga+autotyp.csv
  178. +108 −108 output/wals/wals-newick-ga+geo.csv
  179. +109 −109 output/wals/wals-newick-ga+mg2015(wals).csv
  180. +109 −109 output/wals/wals-newick-ga+wals(euclidean).csv
  181. +109 −109 output/wals/wals-newick-ga+wals(euclidean,mode).csv
  182. +109 −109 output/wals/wals-newick-ga+wals(gower).csv
  183. +109 −109 output/wals/wals-newick-ga+wals(gower,mode).csv
  184. +29 −29 output/wals/wals-newick-nj+asjp16.csv
  185. +67 −67 output/wals/wals-newick-nj+autotyp.csv
  186. +39 −39 output/wals/wals-newick-nj+geo.csv
  187. +46 −46 output/wals/wals-newick-nj+mg2015(wals).csv
  188. +70 −70 output/wals/wals-newick-nj+wals(euclidean).csv
  189. +33 −33 output/wals/wals-newick-nj+wals(euclidean,mode).csv
  190. +70 −70 output/wals/wals-newick-nj+wals(gower).csv
  191. +38 −38 output/wals/wals-newick-nj+wals(gower,mode).csv
  192. +91 −91 output/wals/wals-newick-nnls+asjp16.csv
  193. +105 −105 output/wals/wals-newick-nnls+autotyp.csv
  194. +108 −108 output/wals/wals-newick-nnls+geo.csv
  195. +109 −109 output/wals/wals-newick-nnls+mg2015(wals).csv
  196. +109 −109 output/wals/wals-newick-nnls+wals(euclidean).csv
  197. +109 −109 output/wals/wals-newick-nnls+wals(euclidean,mode).csv
  198. +109 −109 output/wals/wals-newick-nnls+wals(gower).csv
  199. +109 −109 output/wals/wals-newick-nnls+wals(gower,mode).csv
  200. +3,381 −3,382 output/wals/wals-nexus-constant=1.00.nex
  201. +1,918 −1,919 output/wals/wals-nexus-ga+asjp16.nex
  202. +1,104 −2,628 output/wals/wals-nexus-ga+autotyp.nex
  203. +2,815 −2,816 output/wals/wals-nexus-ga+geo.nex
  204. +3,066 −3,067 output/wals/wals-nexus-ga+mg2015(wals).nex
  205. +1,628 −2,954 output/wals/wals-nexus-ga+wals(euclidean).nex
  206. +3,066 −3,067 output/wals/wals-nexus-ga+wals(euclidean,mode).nex
  207. +1,628 −2,954 output/wals/wals-nexus-ga+wals(gower).nex
  208. +3,066 −3,067 output/wals/wals-nexus-ga+wals(gower,mode).nex
  209. +3,381 −3,382 output/wals/wals-nexus-grafen.nex
  210. +362 −362 output/wals/wals-nexus-nj+asjp16.nex
  211. +483 −265 output/wals/wals-nexus-nj+autotyp.nex
  212. +444 −444 output/wals/wals-nexus-nj+geo.nex
  213. +440 −440 output/wals/wals-nexus-nj+mg2015(wals).nex
  214. +1,856 −301 output/wals/wals-nexus-nj+wals(euclidean).nex
  215. +448 −448 output/wals/wals-nexus-nj+wals(euclidean,mode).nex
  216. +1,856 −301 output/wals/wals-nexus-nj+wals(gower).nex
  217. +448 −448 output/wals/wals-nexus-nj+wals(gower,mode).nex
  218. +1,936 −1,937 output/wals/wals-nexus-nnls+asjp16.nex
  219. +1,204 −1,457 output/wals/wals-nexus-nnls+autotyp.nex
  220. +2,817 −2,818 output/wals/wals-nexus-nnls+geo.nex
  221. +3,066 −3,067 output/wals/wals-nexus-nnls+mg2015(wals).nex
  222. +1,711 −1,627 output/wals/wals-nexus-nnls+wals(euclidean).nex
  223. +3,066 −3,067 output/wals/wals-nexus-nnls+wals(euclidean,mode).nex
  224. +1,711 −1,627 output/wals/wals-nexus-nnls+wals(gower).nex
  225. +3,066 −3,067 output/wals/wals-nexus-nnls+wals(gower,mode).nex
  226. +3,381 −3,382 output/wals/wals-nexus-proportional=1.00.nex
  227. +3,381 −3,382 output/wals/wals-nexus.nex
  228. 0 paper/README.md
  229. +0 −751 paper/family-trees-with-brlength.Rmd
  230. +1,075 −0 paper/family-trees-with-brlength.Rnw
  231. 0 paper/family-trees-with-brlength.bib
  232. +0 −4,802 paper/family-trees-with-brlength.html
  233. BIN paper/family-trees-with-brlength.pdf
  234. BIN releases/v1.1.tar.xz
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0 code/.Rhistory
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283 code/FamilyTrees.R 100644 → 100755

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0 code/MatchTreesToData.R 100644 → 100755
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0 code/README.md 100644 → 100755
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239 code/StandardizedTrees.R 100644 → 100755

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4 output/autotyp/autotyp-newick-constant=1.00.csv
@@ -339,7 +339,7 @@ Mombum SUCCESS Path length is constant 1 (('Mombum [i-mso][w-mom][a-2084][g-nucl
Monumbo SUCCESS Path length is constant 1 (('Monumbo [i-mxk][w-mbo][a-2109][g-nucl1458]':0.667)'Monumbo [i-][w-][a-][g-]':0.333);
Naga Pidgin SUCCESS Path length is constant 1 (('Naga Pidgin [i-nag][w-npn][a-2128][g-naga1394]':0.667)'Naga Pidgin [i-][w-][a-][g-]':0.333);
Yale SUCCESS Path length is constant 1 (('Nagatman [i-nce][w-nag][a-2143][g-yale1246]':0.667)'Yale [i-][w-][a-][g-]':0.333);
-Norsk Tegnspråk SUCCESS Path length is constant 1 (('Norsk Tegnspråk [i-nsl][w-nte][a-2205][g-norw1255]':0.667)'Norsk Tegnspråk [i-][w-][a-][g-]':0.333);
+Norsk Tegnspr<U+FFFD><U+FFFD>k SUCCESS Path length is constant 1 (('Norsk Tegnspr<c3><a5>k [i-nsl][w-nte][a-2205][g-norw1255]':0.667)'Norsk Tegnspr<c3><a5>k [i-][w-][a-][g-]':0.333);
Sign Language New Zealand SUCCESS Path length is constant 1 (('Sign Language New Zealand [i-nzs][w-nzs][a-2237][g-newz1236]':0.667)'Sign Language New Zealand [i-][w-][a-][g-]':0.333);
Eleman SUCCESS Path length is constant 1 (('Toaripi [i-tqo][w-toa][a-2604][g-toar1246]':0.667,'Kaki Ae [i-tbd][w-kae][a-2522][g-kaki1249]':0.667,'Orokolo [i-oro][w-orl][a-2256][g-orok1267]':0.667)'Eleman [i-][w-][a-][g-]':0.333);
Papiamentu SUCCESS Path length is constant 1 (('Papiamentu [i-pap][w-pap][a-2269][g-papi1253]':0.667)'Papiamentu [i-][w-][a-][g-]':0.333);
@@ -362,7 +362,7 @@ East Strickland SUCCESS Path length is constant 1 (('Nomad [i-smq][w-nmd][a-2451
Saramaccan SUCCESS Path length is constant 1 (('Saramaccan [i-srm][w-srm][a-2474][g-sara1340]':0.667)'Saramaccan [i-][w-][a-][g-]':0.333);
Sranan SUCCESS Path length is constant 1 (('Sranan [i-srn][w-sra][a-2475][g-sran1240]':0.667)'Sranan [i-][w-][a-][g-]':0.333);
Sign Language Spanish SUCCESS Path length is constant 1 (('Sign Language Spanish [i-ssp][w-lse][a-2485][g-span1263]':0.667)'Sign Language Spanish [i-][w-][a-][g-]':0.333);
-Svenska Teckenspråket SUCCESS Path length is constant 1 (('Svenska Teckenspråket [i-swl][w-svt][a-2503][g-swed1236]':0.667)'Svenska Teckenspråket [i-][w-][a-][g-]':0.333);
+Svenska Teckenspr<U+FFFD><U+FFFD>ket SUCCESS Path length is constant 1 (('Svenska Teckenspr<c3><a5>ket [i-swl][w-svt][a-2503][g-swed1236]':0.667)'Svenska Teckenspr<c3><a5>ket [i-][w-][a-][g-]':0.333);
Jebel SUCCESS Path length is constant 1 (('Ingessana [i-tbi][w-igs][a-2525][g-gaam1241]':0.667)'Jebel [i-][w-][a-][g-]':0.333);
Tikuna-Yuri SUCCESS Path length is constant 1 (('Ticuna [i-tca][w-tic][a-2530][g-ticu1245]':0.667)'Tikuna-Yuri [i-][w-][a-][g-]':0.333);
Kayagar SUCCESS Path length is constant 1 (('Tamagario [i-tcg][w-tmg][a-2533][g-tama1336]':0.667)'Kayagar [i-][w-][a-][g-]':0.333);
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292 output/autotyp/autotyp-newick-ga+asjp16.csv

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352 output/autotyp/autotyp-newick-ga+autotyp.csv

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348 output/autotyp/autotyp-newick-ga+geo.csv

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352 output/autotyp/autotyp-newick-ga+mg2015(autotyp).csv

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336 output/autotyp/autotyp-newick-ga+wals(euclidean).csv

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336 output/autotyp/autotyp-newick-ga+wals(euclidean,mode).csv

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336 output/autotyp/autotyp-newick-ga+wals(gower).csv

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336 output/autotyp/autotyp-newick-ga+wals(gower,mode).csv

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4 output/autotyp/autotyp-newick-grafen.csv
@@ -339,7 +339,7 @@ Mombum SUCCESS Grafen's (1989) method (('Mombum [i-mso][w-mom][a-2084][g-nucl145
Monumbo SUCCESS Grafen's (1989) method (('Monumbo [i-mxk][w-mbo][a-2109][g-nucl1458]':0)'Monumbo [i-][w-][a-][g-]':0);
Naga Pidgin SUCCESS Grafen's (1989) method (('Naga Pidgin [i-nag][w-npn][a-2128][g-naga1394]':0)'Naga Pidgin [i-][w-][a-][g-]':0);
Yale SUCCESS Grafen's (1989) method (('Nagatman [i-nce][w-nag][a-2143][g-yale1246]':0)'Yale [i-][w-][a-][g-]':0);
-Norsk Tegnspråk SUCCESS Grafen's (1989) method (('Norsk Tegnspråk [i-nsl][w-nte][a-2205][g-norw1255]':0)'Norsk Tegnspråk [i-][w-][a-][g-]':0);
+Norsk Tegnspr<U+FFFD><U+FFFD>k SUCCESS Grafen's (1989) method (('Norsk Tegnspr<c3><a5>k [i-nsl][w-nte][a-2205][g-norw1255]':0)'Norsk Tegnspr<c3><a5>k [i-][w-][a-][g-]':0);
Sign Language New Zealand SUCCESS Grafen's (1989) method (('Sign Language New Zealand [i-nzs][w-nzs][a-2237][g-newz1236]':0)'Sign Language New Zealand [i-][w-][a-][g-]':0);
Eleman SUCCESS Grafen's (1989) method (('Toaripi [i-tqo][w-toa][a-2604][g-toar1246]':2,'Kaki Ae [i-tbd][w-kae][a-2522][g-kaki1249]':2,'Orokolo [i-oro][w-orl][a-2256][g-orok1267]':2)'Eleman [i-][w-][a-][g-]':0);
Papiamentu SUCCESS Grafen's (1989) method (('Papiamentu [i-pap][w-pap][a-2269][g-papi1253]':0)'Papiamentu [i-][w-][a-][g-]':0);
@@ -362,7 +362,7 @@ East Strickland SUCCESS Grafen's (1989) method (('Nomad [i-smq][w-nmd][a-2451][g
Saramaccan SUCCESS Grafen's (1989) method (('Saramaccan [i-srm][w-srm][a-2474][g-sara1340]':0)'Saramaccan [i-][w-][a-][g-]':0);
Sranan SUCCESS Grafen's (1989) method (('Sranan [i-srn][w-sra][a-2475][g-sran1240]':0)'Sranan [i-][w-][a-][g-]':0);
Sign Language Spanish SUCCESS Grafen's (1989) method (('Sign Language Spanish [i-ssp][w-lse][a-2485][g-span1263]':0)'Sign Language Spanish [i-][w-][a-][g-]':0);
-Svenska Teckenspråket SUCCESS Grafen's (1989) method (('Svenska Teckenspråket [i-swl][w-svt][a-2503][g-swed1236]':0)'Svenska Teckenspråket [i-][w-][a-][g-]':0);
+Svenska Teckenspr<U+FFFD><U+FFFD>ket SUCCESS Grafen's (1989) method (('Svenska Teckenspr<c3><a5>ket [i-swl][w-svt][a-2503][g-swed1236]':0)'Svenska Teckenspr<c3><a5>ket [i-][w-][a-][g-]':0);
Jebel SUCCESS Grafen's (1989) method (('Ingessana [i-tbi][w-igs][a-2525][g-gaam1241]':0)'Jebel [i-][w-][a-][g-]':0);
Tikuna-Yuri SUCCESS Grafen's (1989) method (('Ticuna [i-tca][w-tic][a-2530][g-ticu1245]':0)'Tikuna-Yuri [i-][w-][a-][g-]':0);
Kayagar SUCCESS Grafen's (1989) method (('Tamagario [i-tcg][w-tmg][a-2533][g-tama1336]':0)'Kayagar [i-][w-][a-][g-]':0);
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106 output/autotyp/autotyp-newick-nj+asjp16.csv

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