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19 followers · 17 following · 111
  • LBNL
  • Berkeley, California

Highlights

  • Arctic Code Vault Contributor

Organizations

@GMOD @berkeleybop @monarch-initiative @geneontology @OBOFoundry @NCATS-Tangerine @biolink @microbiomedata @NCATSTranslator @Knowledge-Graph-Hub @COV-IRT

Pinned

  1. berkeleybop.github.io

    Forked from berkeleybop/berkeleybop.github.io

    Homepages for the Berkeley BOP.

    CSS

  2. biolink-api

    Forked from biolink/biolink-api

    API for linked biological knowledge

    Python

  3. kgx

    Forked from biolink/kgx

    knowledge graph exchange tools for biolink-compatible graphs

    Python

  4. biolink-model-toolkit

    Forked from biolink/biolink-model-toolkit

    A set of python functions for using the biolink model

    Python

  5. N2V

    Forked from monarch-initiative/embiggen

    Python library for the node2vec family of algorithms

    Jupyter Notebook

  6. kg-covid-19

    Forked from Knowledge-Graph-Hub/kg-covid-19

    KG hub for COVID-19 and related emerging viruses

    Python

1,492 contributions in the last year

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Contribution activity

October 2020

Created a pull request in Knowledge-Graph-Hub/kg-covid-19 that received 1 comment

Remap Chembl target to NCBITaxon for SARS-CoV-2 [_run_jenkins]

Remaps ChEMBL Target node for SARS-CoV-2 to the actual NCBITaxon. Also fixes a bug in the generated nodes and edges TSV where the columns were bei…

+15 −6 • 1 comment

Created an issue in NCATSTranslator/ReasonerAPI that received 6 comments

TRAPI Node and Edge properties are different from Biolink Model Node and Edge properties

Biolink Model has id, name, category as core properties of a node in a graph. TRAPI specification has id, name, type as core properties of a TRAPI …

6 comments

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