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  • LBNL
  • Berkeley, California


  • Arctic Code Vault Contributor


  1. Forked from berkeleybop/

    Homepages for the Berkeley BOP.


  2. Forked from biolink/biolink-api

    API for linked biological knowledge


  3. Forked from biolink/kgx

    knowledge graph exchange tools for biolink-compatible graphs


  4. Forked from biolink/biolink-model-toolkit

    A set of python functions for using the biolink model


  5. Forked from monarch-initiative/embiggen

    Python library for the node2vec family of algorithms

    Jupyter Notebook

  6. Forked from Knowledge-Graph-Hub/kg-covid-19

    KG hub for COVID-19 and related emerging viruses


Contribution activity

October 2020

Created a pull request in Knowledge-Graph-Hub/kg-covid-19 that received 1 comment

Remap Chembl target to NCBITaxon for SARS-CoV-2 [_run_jenkins]

Remaps ChEMBL Target node for SARS-CoV-2 to the actual NCBITaxon. Also fixes a bug in the generated nodes and edges TSV where the columns were bei…

+15 −6 1 comment

Created an issue in NCATSTranslator/ReasonerAPI that received 6 comments

TRAPI Node and Edge properties are different from Biolink Model Node and Edge properties

Biolink Model has id, name, category as core properties of a node in a graph. TRAPI specification has id, name, type as core properties of a TRAPI …


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