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KuangYu and others added 30 commits May 5, 2022 11:05
Correct link path in README.md
add nblist wrapper and its docs
fix: classical kernel can be jitted
* feat:rewrite renderXML with very clean commit history

* fix bug in Torsion renderXML

* add test_utils as a placehold

* fix: fix typo in api.py

* docs: add renderXML related api usages
KuangYu and others added 29 commits June 9, 2022 21:22
add step_pol arg in ADMPPmeForce __init__ to fix it can not be jitted
…d xml (input:pdb,xml output: multipoles/polarizabilities/tholes...)

use forcefield.xml instead of other xmls, add read_admp_xml in parser in order to read the new form of xml file
change line 795 in pme.py and add distribute_matrix in pairwise.py in order to wrap a jit outside my admp_calculator
Conflicts:
	dmff/admp/pme.py
	dmff/admp/recip.py
	dmff/api.py
	dmff/classical/inter.py
	dmff/classical/intra.py
	dmff/common/nblist.py
	tests/test_common/test_nblist.py
* add(CI/CD): unittest workflows

* add(requirements): dependencies list

* update(doc): fix bad render of \hat

* update(doc): add examples and doc struct refine
Fluctuated leading term water force field
update docs config and fix typo bugs
* update(doc): fix bad render of \hat

* update(doc): add examples and doc struct refine

* hotfix(docs): license bugs
@Ericwang6 Ericwang6 merged commit 846e3b8 into master Jun 14, 2022
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6 participants