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Copyright (c) 2015-2016 Deniz Yorukoglu. All rights reserved.

This package implements the CORA algorithm described in:

Deniz Yorukoglu, Y. William Yu, Jian Peng, Bonnie Berger. "Compressive Mapping for Next-Generation Sequencing" Nature Biotechnology 34, 374–376 (2016) doi:10.1038/nbt.3511. http://www.nature.com/nbt/journal/v34/n4/full/nbt.3511.html

http://cora.csail.mit.edu/


Package contents:

  • Source code for CORA framework v1.1.5b (excluding coarse mapper to be plugged in, a mapper of choice should be downloaded separately for coarse mapping)
  • Internal data files (.dat)
  • Makefile
  • Manual
  • License

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Compressive Read-mapping Accelerator

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