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@tmp-workshop

Popular repositories

  1. pyrad

    Assembly and analysis of RADseq data sets

    Python 22 18

  2. ipyrad

    Interactive assembly and analysis of RAD-seq data sets

    Jupyter Notebook 22 16

  3. simrrls

    Simulate raw restriction-site associated DNA fastq files

    Python 3 5

  4. virentes

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  5. crano-popgen

    Assembly for furbishiae study

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  6. pedicularis-WB-GBS

    Assembly and analysis of PE-GBS data set for Yu-Eaton-Ree 2012 data set.

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580 contributions in 2015

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Activity overview
Contributed to dereneaton/dereneaton.github.io, dereneaton/ipyrad, dereneaton/pyrad and 5 other repositories
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Contribution activity

December 2015

Created an issue in dereneaton/ipyrad that received 2 comments

ideas for speed improvements to step2

Ideas: Parallelize tmp file concatenation step. Don't gzip temp files (Done.) Use heapq method to concatenate files.

2 comments

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