diff --git a/scripts/extract-partitions.py b/scripts/extract-partitions.py index ed1e46a4fe..71ce45cc79 100755 --- a/scripts/extract-partitions.py +++ b/scripts/extract-partitions.py @@ -52,17 +52,14 @@ import screed import argparse import textwrap -<<<<<<< HEAD from contextlib import contextmanager import khmer -======= -from khmer import __version__ ->>>>>>> master + from khmer.kfile import (check_input_files, check_space, add_output_compression_type, get_file_writer) from khmer.khmer_args import (info, sanitize_help, ComboFormatter, - _VersionStdErrAction) + _VersionStdErrAction, __version__) from khmer.utils import write_record DEFAULT_MAX_SIZE = int(1e6) @@ -77,12 +74,8 @@ def read_partition_file(filename): def get_parser(): -<<<<<<< HEAD """Create parser for extract-partitions.py.""" epilog = """ -======= - epilog = """\ ->>>>>>> master Example (results will be in ``example.group0000.fa``):: load-graph.py -k 20 example tests/test-data/random-20-a.fa