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fixed syntax error

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1 parent aca3581 commit ba2a931774326557c5346b1f7c62eae4afe39c85 @cybersiddhu cybersiddhu committed Mar 30, 2012
Showing with 3 additions and 2 deletions.
  1. +1 −1 lib/Modware/Load/Command/gb2chado.pm
  2. +2 −1 lib/Modware/Loader/Genome/GenBank.pm
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2 lib/Modware/Load/Command/gb2chado.pm
@@ -21,7 +21,7 @@ has 'source' => (
isa => 'Str',
lazy => 1,
default => 'genbank:nucleotide',
- documentation => 'source of genome, default is *genbank*'
+ documentation => 'source of genome, default is genbank:nucleotide'
);
has 'dbsource' => (
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3 lib/Modware/Loader/Genome/GenBank.pm
@@ -919,7 +919,8 @@ sub chado_dbxref {
sub calculate_polypeptide_seq {
my ( $self, $trans ) = @_;
my $model = Bio::SeqFeature::Gene::Transcript->new(
- -seq_id => 'model_transcript' -strand => $trans->strand,
+ -seq_id => 'model_transcript',
+ -strand => $trans->strand,
-start => $trans->start,
-end => $trans->end
);

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