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Fixing missing file names

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tjakobi committed Jul 11, 2019
1 parent 029ada6 commit 25b029462b7a031495a5bafaabb1f12b4549fdcb
Showing with 1 addition and 3 deletions.
  1. +1 −3 scripts/circtools_merge_enrich_results.sh
@@ -22,6 +22,4 @@ if [ ! $# == 4 ]; then
exit
fi

ITER=$2

awk -F '\t' "{{print FILENAME"\t"\$0}}" $1/*.csv | sed 's/_.*$ITER_.*.csv//g' | grep -v circRNA_host_gene > $3/$4
awk -v OFS='\t' -F '\t' '{print FILENAME,$0}' $1/*.csv | sed "s/_${2}_.*.csv//g" | sed "s~$1~~" | sed "s~/~~" | grep -v circRNA_host_gene > $3/$4

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